Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach11g00943 | ATGGAAGGAAGCAAAGCTGAGGGAAAGAGGACCTTGAAGTACAAGGATGAGGAATTAGAAGATGAAGAAGAGGAAGATGATGATCTTACTGATGTGGGTTTTGGATCAGAAGATGGGAGAAAGAAGAGAGTGATGACAGATCTCCACGGTGCTAAGAAAGGGTCCAAAGCTGGAGCCTCTTCAATGCCACCTTCTTGTCAGGTGGAGACTTGCCACACTGATCTAACTAATGCTAGGCAGTATCATCGGAGGCACAAGGTCTGTGAGTACCACGCCAAGGCTCTTTCCGTACTCATGGCAGGGCTTCAGCAACGTTTTTGCCAGCAATGTAGCAGATTTCATGAGCTCTCTGAGTTTGATGAGTCTAAAAGAAGTTGTAGAAGACGTTTGGCAGGACATAACGAGAGGCGTCGAAAGACTACATCTGATTACCATGGAGAAGGATTGAATTAA | 453 | 0.457 | MEGSKAEGKRTLKYKDEELEDEEEEDDDLTDVGFGSEDGRKKRVMTDLHGAKKGSKAGASSMPPSCQVETCHTDLTNARQYHRRHKVCEYHAKALSVLMAGLQQRFCQQCSRFHELSEFDESKRSCRRRLAGHNERRRKTTSDYHGEGLN | 150 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach11g00943 | 150 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Bach11g00943 | 150 | Coils | Coil | 5 | 25 | - | - | |
Bach11g00943 | 150 | SUPERFAMILY | SBT domain | 64 | 144 | IPR036893 | GO:0003677|GO:0005634 | |
Bach11g00943 | 150 | PIRSF | SBP | 1 | 150 | IPR017238 | GO:0003677|GO:0003700|GO:0009908 | |
Bach11g00943 | 150 | MobiDBLite | consensus disorder prediction | 1 | 66 | - | - | |
Bach11g00943 | 150 | MobiDBLite | consensus disorder prediction | 18 | 32 | - | - | |
Bach11g00943 | 150 | ProSiteProfiles | Zinc finger SBP-type profile. | 63 | 140 | IPR004333 | GO:0003677 | |
Bach11g00943 | 150 | Gene3D | - | 56 | 127 | IPR036893 | GO:0003677|GO:0005634 | |
Bach11g00943 | 150 | Pfam | SBP domain | 66 | 139 | IPR004333 | GO:0003677 | |
Bach11g00943 | 150 | MobiDBLite | consensus disorder prediction | 136 | 150 | - | - | |
Bach11g00943 | 150 | PANTHER | SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 | 35 | 141 | IPR044817 | GO:0003677 | |
Bach11g00943 | 150 | FunFam | Squamosa promoter-binding-like protein 14 | 57 | 127 | - | - | |
Bach11g00943 | 150 | MobiDBLite | consensus disorder prediction | 131 | 150 | - | - | |
Bach11g00943 | 150 | MobiDBLite | consensus disorder prediction | 33 | 50 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach11g00943 | Bach-Chr11 | 8379211 | 8380508 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach11g00943 | 1 | 143 | SBP-box Gene Family | AT2G33810 | 51.049 | 1.39e-42 | 136 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SBP | Bach11g00943 | SBP | 1e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach11g00943 | - | - | qsa:O6P43_031859 | 188.734 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bach11g00943 | 11 | 8379211 | 8380508 | Bach7g00593 | 7 | 16389635 | 16391102 | BWGD |