Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00940 ATGGCTGCAGCTTCTGCAGCTCTGAATTCCCTCTCTTCTCTCTCCCTTCACTCCTCTACACGCTTGTCCGTGCTACCCACTGCCAAATTCTCCTTCTCCCTTACCACCCGAAACCCACAACCCTTCCTCTCCGCCTCCTCATTTCCCATTGTTTCTTTCGGCACAATCAAAACCAAATCCTCCGATGAAATCGACACCTACTTCTTCGACAATGTGAACCCAGAAGAAGAAATTCCTTTCAATCCCCCGGAAAAACCTGAAGGCTTCGTTGCCCCTCCTTCCTTTGATGATGGACCTATGGAGACTGAAGATGAAATTTCCGCAGCATATGAGGAACTTTATGGTCCTGTATACAGTGGCGTTAGCGTTCTTGGCCAAGATATAAACGTAATGGACTCTAAGGTGAAGAAGGAAAGTCGGCTTGTTTCAAAAGAGATAGAGAAGATTAGGGATGGGTTTGACGAAAGAGTGATACAGGTTAGAAGGGTCACCAAGGTGGTGAAAGGAGGGAAGCAAATGCGTTTCAGGGCAATTGTGGTGGTGGGTGACAAGAAAGGCCAAGTGGGTGTTGGAGTTGGGAAAGCAAGGGAAGTGATAGCTGCAGTTCAGAAATCAGCTGTAAATGCTAGGAGGAATATCATCACAGTGCCTATGACTAAGTACCTGACTTTCCCACATAGAACTGAAGGAGATTTTGGTGCAGCAAGAGTGATGCTTAGACCTGCTTCTCCTGGTACTGGAGTTATTGCTGGTGGGGCTGTGAGAATTGTTCTAGAAATGGCAGGTGTGGAGAATGCTTTGGGAAAACAACTTGGTAGTAATAATGCCCTTAACAATGCCAGAGCCACGGTTGTTGCTGTACTAAAAATGAGGCAGTTCAGTGAAGTTGCTAAGGAGCGTGGGATCCCCATGGAAGAGCTATGGAAGTAATGAAATTCTGTAGCTGCTATATTATGCTTATTTTATTCGCAAATCTTTGTGATATAGAACTAGTTCATTTTTTTGTTATGAAGTTTTCTTGACGTCATTATCTTATTGGAAAGCTGCTTGTTCAACTTGTTTCAAATTTAATAGATTCAAGATTCCAAATTTAT 1094 0.4378 MAAASAALNSLSSLSLHSSTRLSVLPTAKFSFSLTTRNPQPFLSASSFPIVSFGTIKTKSSDEIDTYFFDNVNPEEEIPFNPPEKPEGFVAPPSFDDGPMETEDEISAAYEELYGPVYSGVSVLGQDINVMDSKVKKESRLVSKEIEKIRDGFDERVIQVRRVTKVVKGGKQMRFRAIVVVGDKKGQVGVGVGKAREVIAAVQKSAVNARRNIITVPMTKYLTFPHRTEGDFGAARVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQLGSNNALNNARATVVAVLKMRQFSEVAKERGIPMEELWK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00940 309 ProSitePatterns Ribosomal protein S5 signature. 170 202 IPR018192 -
Bach11g00940 309 Hamap 30S ribosomal protein S5 [rpsE]. 131 306 IPR005712 GO:0003735|GO:0006412|GO:0015935
Bach11g00940 309 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN S5 140 304 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bach11g00940 309 Pfam Ribosomal protein S5, C-terminal domain 230 300 IPR005324 GO:0003735|GO:0005840|GO:0006412
Bach11g00940 309 ProSiteProfiles S5 double stranded RNA-binding domain profile. 153 216 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bach11g00940 309 FunFam 30S ribosomal protein S5 218 309 - -
Bach11g00940 309 Gene3D - 220 308 IPR014721 -
Bach11g00940 309 Pfam Ribosomal protein S5, N-terminal domain 153 217 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Bach11g00940 309 NCBIfam 30S ribosomal protein S5 152 306 IPR005712 GO:0003735|GO:0006412|GO:0015935
Bach11g00940 309 FunFam 30S ribosomal protein S5 143 214 - -
Bach11g00940 309 Gene3D - 144 214 - -
Bach11g00940 309 SUPERFAMILY dsRNA-binding domain-like 149 218 - -
Bach11g00940 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 223 301 IPR020568 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00940 153 309 Cytoplasmic Ribosomal Protein Gene Family AT2G41840 29.697 3.89e-16 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00940 K02988 - qsa:O6P43_012664 444.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00940 11 8330598 8333165 Bach11g00940 11 8330598 8333165 ECH