Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00922 ATGAGAGAGACAGAACATTCCAATGGTTGTTTTGATTGCAACATCTGCTTAGACTTTGCACATGAACCAGTTGTGACCCTCTGCGGCCACCTTTACTGCTGGCCCTGCATCTACAAGTGGCTTCATATCCAAAATGCTTCTCTTGCATCTGATGAGCACCCGCAATGCCCAGTTTGCAAGGATGATATATCCCATACCACAATGGTACCATTATATGGTCGCGGCCAGGCCTCAGCGCAGAATCAGCATGACAGTAAAGCATCTTATCGAGATGTATTTGTGCCCCCAAGGCCACCTGCTTCCGGTGCTCAAGCTCTGTTGGGGACATCATCTCAAAACTTTCAGCAACTCCCATATCATAGTCCTTATCAGAGTCAACATCACAGCACCTCACTAGAGAATACTTCCTCACAAATGCTGAATCTTGGCACCACCATGACGCCAGAATCCAACGACCCTGTGGTTGGGATGTTTGGAGAGATGGTTTATGCTAGAGTGTTTGGCAACCCAGAAAACCTGTATGCTTACCCGAATTCATATCACCTGATGGGAAGTAACAGCAATAGATTGAGAAGGCAGGAGATGCAGGCAGACAAGTCGTTGAACAGAATTTCAATTTTCCTCTTTTGCTGCCTTCTCTTGTGTCTTATTGTCTTTTGA 660 0.4606 MRETEHSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHIQNASLASDEHPQCPVCKDDISHTTMVPLYGRGQASAQNQHDSKASYRDVFVPPRPPASGAQALLGTSSQNFQQLPYHSPYQSQHHSTSLENTSSQMLNLGTTMTPESNDPVVGMFGEMVYARVFGNPENLYAYPNSYHLMGSNSNRLRRQEMQADKSLNRISIFLFCCLLLCLIVF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00922 219 SMART ring_2 13 59 IPR001841 -
Bach11g00922 219 Pfam Zinc finger, C3HC4 type (RING finger) 13 59 IPR018957 GO:0046872
Bach11g00922 219 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 4 216 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bach11g00922 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 136 IPR013083 -
Bach11g00922 219 SUPERFAMILY RING/U-box 9 72 - -
Bach11g00922 219 ProSiteProfiles Zinc finger RING-type profile. 13 60 IPR001841 -
Bach11g00922 219 ProSitePatterns Zinc finger RING-type signature. 28 37 IPR017907 -
Bach11g00922 219 CDD RING-HC_AtRMA-like 11 60 - -
Bach11g00922 219 FunFam E3 ubiquitin-protein ligase RMA1H1 isoform A 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00922 Bach-Chr11 8146044 8146703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00922 8 205 C3H Transcription Factor Family AT4G27470 43.564 1.54e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00922 K10666 - qsa:O6P43_031837 317.775