Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00912 ATGAGTTGTTGCTGCTTCAGGGCCTCAACTTCAAAGAAGAAAAGAAGTTCTTCTCTTGCTCCACGAGTCATTGATGGCATTCCACTTGATAATATTAGGCATTTCTCTGAGCAAGAACTAAGGTTGGCAACCGATGATTTTGATATGAGAAATAAGATTGGACGAGGAGGTTTTGGAACTGTTTATCAGGGGATCTTGAAAGATGGAAAGAAGGTTGCAGTGAAGAGCCTTTCTGCTGGATCAAGACAGGGAGTTCGCGAATTTTTAACCGAGATTAAGACTATATCAAATGTCAGGCATCCAAACCTTGTTGAATTGGTTGGCTGCTGTGTTCAAGGACCTAATCGTATCTTAGTCTATGAATATGTGGAAAATAACAGCCTTAACCGTGCATTACTTGGCTCAAGGAATACTAGCATCAAACTGGACTGGAGTAAAAGATCTGCCATTTGCATGGGTACTGCTAGGGGTCTAGCATTCCTTCATGAAGAACTTGTGCCCCATATCGTGCACAGAGACATCAAAGCTAGCAACATATTACTTGACAAAGACTTCAATCCAAAAATAGGAGATTTTGGGGTGGCTAAACTATTTCCAGACAACATCACTCACATTAGCACAAAAATTGCTGGAACAACTGGTTATTTAGCACCAGAGTATGTGTTAGGTGGCCAGTTAACCATGAAGGCTGACGTATATAGCTTTGGGGTTCTTACATTTGAAATAATGAGTGGCAAAAGCAGTTCAAGGACAAACTGGGGAGGGACAGAGAAATTCCTCTTGGAATGGGCCTGGGAACTTTATAAGGAGGGGAGACTCTTGGAGCTCGTAGATCCAGAGATGGGGGAATTTCCAGAGGAAGAAGTAATTAGGTTCATGAAGGTGGCCCTTTTCTGCACACAGGCAGCAGCTAGCAGGAGGCCATTGATGTCCCAAGTTGTAGATATGCTCTCCAGGAATATCCGGCTTAACGAGAAGCAACTTACTGCGCCAGGATTCTTCCAAGATTCAGGCCTAAGTGGAGAATCTTCTCTAAACCAGTCATCCATGGACCATACAAGCAGTCATATTAGCTCTGCCCCTGTCAGTATCACTCAAGTGACCCCACGATGA 1113 0.4358 MSCCCFRASTSKKKRSSSLAPRVIDGIPLDNIRHFSEQELRLATDDFDMRNKIGRGGFGTVYQGILKDGKKVAVKSLSAGSRQGVREFLTEIKTISNVRHPNLVELVGCCVQGPNRILVYEYVENNSLNRALLGSRNTSIKLDWSKRSAICMGTARGLAFLHEELVPHIVHRDIKASNILLDKDFNPKIGDFGVAKLFPDNITHISTKIAGTTGYLAPEYVLGGQLTMKADVYSFGVLTFEIMSGKSSSRTNWGGTEKFLLEWAWELYKEGRLLELVDPEMGEFPEEEVIRFMKVALFCTQAAASRRPLMSQVVDMLSRNIRLNEKQLTAPGFFQDSGLSGESSLNQSSMDHTSSHISSAPVSITQVTPR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00912 370 SMART serkin_6 47 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00912 370 CDD STKc_IRAK 53 319 - -
Bach11g00912 370 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 30 353 - -
Bach11g00912 370 MobiDBLite consensus disorder prediction 341 370 - -
Bach11g00912 370 FunFam cold-responsive protein kinase 1 20 122 - -
Bach11g00912 370 FunFam Putative LRR receptor-like serine/threonine-protein kinase 123 329 - -
Bach11g00912 370 Pfam Protein kinase domain 50 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00912 370 Gene3D Phosphorylase Kinase; domain 1 22 122 - -
Bach11g00912 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Bach11g00912 370 ProSiteProfiles Protein kinase domain profile. 47 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00912 370 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524
Bach11g00912 370 Gene3D Transferase(Phosphotransferase) domain 1 123 330 - -
Bach11g00912 370 SUPERFAMILY Protein kinase-like (PK-like) 31 337 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00912 Bach-Chr11 8056194 8058798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00912 35 361 Receptor kinase-like Gene Family AT1G56120 50.904 6.83e-111 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bach11g00912 Pkinase 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00912 - - gmx:100788143 578.941