Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00905 ATGACTTCACTTGCTTGGACTCTATCTTCCGCTTCACAATCGAGGTCTTCTCGATTTTCCTCTCTCCCAACAAGAAAGAAGGACTACACAAAAGTGGTCTTCAATATTTCTTACCTTTATTTTAAGGACTTTGGTATGTGCAGTGGTCCGAAAAGTAAACTTTGCTCCTCAAACCACAACATGGGAAGCGAGCATCAAAAGCGGAAGGATGATCTCTACAAAACTGAGAACTTCTCAGTTTTGCTTGAATTGGCTGCATCTGATGATCTTGAAGCTTTCAGAACTGAAGTAGAAGAGAGATATTTTGACGTCAACGAGGCAAGCTTTTGGTATGGTAGAAGAATTGGGTCAAAAAAGATGGGGACTGAGAAGAGGACGCCCCTCATGATTGCTTCTTTATTTGGAAGTACTAGGGTTCTGAAGTACATAATTGAGAAGGGTAGGGTTGATGTGAATAGGGCCTGTGGTTCTGATAGAGCCACTGCTCTCCATTGTGCTGTTGCTGGTGGTGCAGAATCTTCGCCTGAGATAGTTAAGCGCTTGCTTGATGCTCAGGCTGATGTTGATTGCCTTGATGCTAGTGGAAATAAGCCTATTAATCTGATTGCCCCAGGTTTTAATTCTTTGTCCAGTTCAAGAAGGAGGGGCATGGAGTTGTTGCTCAGAGGAGGAGAAGGAGCAGTCAATCAGGAGTTAGAAGAAAAAATCTCGGTGGCTTCTTTATCATCAAAAGAAGTAATGGAGAAGAAAGACAAGGAAGGATCAGAGAAGAAAGAATATGCTGTTGATGTAACATTGCCTGACATAAACAATGGTATATATGGAACAGATGAGTTCAGAATGTATAGTTTTAAGGTGAAGCCTTGCTCCAGGGCATATTCCCATGACTGGACCGAGTGTCCATTTGTTCATCCTGGGGAGAATGCAAGGAGAAGAGACCCAAGGAAGTATCCTTACAGCTGTGTTCCCTGCCCAGAGTTTCGTAAAGGGTCCTGCCAGAAGGGGGATGCCTGTGAATATGCACATGGTGTATTTGAGTCTTGGCTCCATCCTGCCCAGTACAGAACACGGCTTTGCAAGGAAGAGTCTCTGTGCACTAGGAAAGTCTGCTTCTTTGCTCACAGACCTGAAGAGTTACGCCCTGTGTATGCTGCCACTGGGTCAGCCATGCCTTCACCTAAGTCCTTCTCATCCTGTGGGCTTGACATGACCACTATGAGTCCATTGTCTCTTAGTTCCTCATCTTTGCCGATGCCAACCGTTTCAACACCACCCATGTCTCCCTTGGCAGCAGCGTCATCTCCCATGAGCGGAAACCTGAGGCAGAACAAAATAGGCCTCACGCCACCATCCTTGCAGCTTCCTGGTAGCCGGCTGAAGAGTGCTTTGAATGCTAGGGATTTTGAATTGGAAATGGAATTGCTTGGACTAGAAAGTTCTGCTAGCCAACAGCAGCAGCAATTGATAGAAGAGATTAAGCTGATCTCTTCTCCGTCTTTCCGCAACAATAGGATTGGTGATTTGAAGCCAACTAACCTAGATGGCCTTTTAGGATCTGTTGATCCTTCTGTATTGTCTCAATTACATGGTCTTTCAGTCCAACCTTCAACACCTAGTCAATTGCAGTCTCCAAATGCACTTCAAATGCGCCAAAACATGAACCACCTTCGTGCAAGCTATCCAACAAACATGCCTTCCTCTCCAGTGAGAAAACCCCCAACGTATGGTTTTGATTCATCAGCTGCTGTGGCAGCTGCACTGATGAACTCCAGGTCTGCTGCCTTCACAAAGCGAAGCCAAAGTTTTATTGATCGTGGAGCAGTGAACAATCTTTCTGGGCTATCTGCAGCTTCCGGCCCTCCCTGCAGGATGTCTTCTACCCTTTCAGATTGGAGTTCCCCTGATGGGAAATTGGATTGGGGCATTAACGGAGATGATCTGAACAAGCTGAAGAAATCTTCTTCTTTTGGGTTCCGAAACAATGGGGTAACTGCCAGGTCCTTGTCTGAAAATGTTGAGCCTGATGTCTCTTGGGTTAGTTCCTTGGTTAAGGATGTTCCCTCTGAGAATTCTAAGATGTTTGGTGCTCAGCAGCAGCACGATCTCAGCAAAGAGATGCTTCCACCATGGGTGGAGCAACTGTACATAGAGCAAGAGCAGATGGTAGCATAA 2172 0.4572 MTSLAWTLSSASQSRSSRFSSLPTRKKDYTKVVFNISYLYFKDFGMCSGPKSKLCSSNHNMGSEHQKRKDDLYKTENFSVLLELAASDDLEAFRTEVEERYFDVNEASFWYGRRIGSKKMGTEKRTPLMIASLFGSTRVLKYIIEKGRVDVNRACGSDRATALHCAVAGGAESSPEIVKRLLDAQADVDCLDASGNKPINLIAPGFNSLSSSRRRGMELLLRGGEGAVNQELEEKISVASLSSKEVMEKKDKEGSEKKEYAVDVTLPDINNGIYGTDEFRMYSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYSCVPCPEFRKGSCQKGDACEYAHGVFESWLHPAQYRTRLCKEESLCTRKVCFFAHRPEELRPVYAATGSAMPSPKSFSSCGLDMTTMSPLSLSSSSLPMPTVSTPPMSPLAAASSPMSGNLRQNKIGLTPPSLQLPGSRLKSALNARDFELEMELLGLESSASQQQQQLIEEIKLISSPSFRNNRIGDLKPTNLDGLLGSVDPSVLSQLHGLSVQPSTPSQLQSPNALQMRQNMNHLRASYPTNMPSSPVRKPPTYGFDSSAAVAAALMNSRSAAFTKRSQSFIDRGAVNNLSGLSAASGPPCRMSSTLSDWSSPDGKLDWGINGDDLNKLKKSSSFGFRNNGVTARSLSENVEPDVSWVSSLVKDVPSENSKMFGAQQQHDLSKEMLPPWVEQLYIEQEQMVA 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00905 723 SMART ANK_2a 158 190 IPR002110 GO:0005515
Bach11g00905 723 SMART ANK_2a 123 153 IPR002110 GO:0005515
Bach11g00905 723 PANTHER UNKEMPT FAMILY MEMBER 83 686 IPR045234 -
Bach11g00905 723 Pfam Ankyrin repeats (3 copies) 119 190 IPR002110 GO:0005515
Bach11g00905 723 SUPERFAMILY Ankyrin repeat 76 207 IPR036770 -
Bach11g00905 723 ProSiteProfiles Zinc finger C3H1-type profile. 318 345 IPR000571 GO:0046872
Bach11g00905 723 Gene3D - 319 381 - -
Bach11g00905 723 Gene3D - 51 254 IPR036770 -
Bach11g00905 723 ProSiteProfiles Ankyrin repeat profile. 158 193 IPR002110 GO:0005515
Bach11g00905 723 SMART c3hfinal6 353 376 IPR000571 GO:0046872
Bach11g00905 723 SMART c3hfinal6 318 344 IPR000571 GO:0046872
Bach11g00905 723 FunFam Zinc finger CCCH domain-containing protein 66 276 344 - -
Bach11g00905 723 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 323 343 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00905 Bach-Chr11 8022589 8025615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00905 76 718 C2H2 Transcription Factor Family AT5G12850 38.669 4.86e-135 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bach11g00905 Ank_2 2.7e-07 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00905 - - gmx:100783376 929.472