Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00890 TCGGTATTGATGTGATTTTACGCTTTTCGAGCTCTTGTTAATGGCGGATGCGAGCGTCGACTATTTGCGACTGGCTAACGGGGACTTTGATGAGTTCAACGCTGCGGATAACGACGTGCATATAGATCTTGATACAATTCTCCGCGTGCTTGATGAGAATTCCGATCCTTCTGAGAATAGTCCAGATGATACCTCATTAAAAAACGTGTCTCCTGGAGAGTCTGGTACCCGTGATAATTCTCAGCTTCAAAGTGGGAATTCTGTGTTTGACTATGAAAATGAAAACAATGGACCGTCTTCACCGACTTGCTTTTCCCTGCATGCTTTCCCTGGAAGTCGCAGGGATGTAAACTTTGTGGTTGAAAGTGAAGGGATTTACTCCACTGAAAGGGCAGGGTCTTCTGGATCTCAGATACCCACTCATGGTGGAGAACCTAGTTTCACTGAAGCGTATTTAAACAAAATGTCGAATTGTGGAGATAGTGTGTATGGGAGTCTGTGGAATGGTGACAATGAGTGCAAGTTCAAACCTATTGGAGATGATGTTGAATCTGGATATGCTTCGCACAGCCCTATGATTGGGGATTTTGATTTAAATTTTGGCCACTATGGAGCTCTTGATGAAGATACTACTGGTGGAGTTTCTGGGATACAACAGAACGACTCATGTACATCTTTTGAAATGACATTCATGGATGCTGATAGGTCTTCACATATTGCGACTTCAGCTGATTCTACAATTTGCCAAGGTTCCAATGTCCTTAGTGATTATGGAGACTACCATTCATCCATGCTTTATTGCATGGGTGCAGATGGTTATTTGACTAATGGTGTTGGTTATCAAATTTGTCCAACTGAAGAAGAAACTATGACTAACGTGAAGGATGAGAAAGTAGAGTTCTTAGCTGATACTGCATGTGTGAGTAGTAACATGCATTCCGCTGCTCGTGGGGGGATACCTTTCCAAGATAGTAAATATATATCACCAGATAGTGGACATTCTTCATTTTTTTCTGGTAATGTTCTCCTTGAAGAGAAGGGATCAGTACAGCTTTCACCTTGTGCTCCATACAAGCAAAGCCTAGACCAAGCTATTTGTGTCAAAAGTAAAAGAGATAAACTGATTACTGCTTACCAGGATTCTTCTCATTGTGATGATGCAGAGTTTAATACAGGGCGAGACATGAAGCAGTTACCTGGTATTTTTCCTGTCACTGGATGTCAGAGTTTTGATTTCTTAAAGCATGAGGATAAAGATACAGTCATAAAGTCTAATGGTTCCCATAAATATCAAGATATAAATTATGGAAATGCTAATAAGTTTCTAGGAACCATGGGCAATTTGAATTTAAAAGCCTTAGACGAATCTTTACCCTATCCAAATGCCTCAATTGCTAGTGAGAAGTTTGGTAATATAAAGAGTCGAGAAGAGGTCAACTTGTTTCACCATGGAAGTGCTGATTCTTGTTTTTCAAAAGTTGGTACTGAAGTGTTTCAAAGAGATTTCTTGGAGAGATCCCATGTTGAGGATGACTCTGATGTTTGCATTATTGAAGACATCAGTCACCCTGCACCTACAAGTCATTCTGCCAACCTTGGGAATTCCCTTAGTTTATCACAGGGTTCTACATATGGTGGCTCACATACTCACATGATAGCTAACACAAGGTCGAAGGCATGTGATGAGCGATATATATTACGAGTACTAAAGGATCTATCTCAACCAAAATCAGAAGTTACTCCACCAGATGGATTACTGGCAGTTCCTCTTCTAAGGCATCAGAGAATTGCTTTATCATGGATGGTTCAAAAAGAAACATCAGGTTTATATTGCTATGGAGGCATTCTTGCAGATGATCAGGGACTTGGAAAAACAGTGTCAACTATTGCTTTATTACTAAAGGAAAGACCTTCAACATTTAGACCTTGTCAAAATGATCAAAAAGGCAAATTAGAAACTCTGAATCTAGATGCAGATGATGATGTGCTTCCTGAGAATGATGGAAAGAACAAAATTGCTAGTACGGGTTGCAATATGTCTAGTGGATGTCCAATGAAAAACATAGATCGAGCAAAGGGAAGGCCATCTGCAGGAACTCTTATTGTTTGCCCCACTAGTGTCCTGCGGCAATGGGCTGAGGAGTTAAACACCAAAGTAACAAGTAAAGCAAATCTCTCTGTGCTTGTGTACCATGGAAGCAATCGATTAAAAGATCCTTATGAGCTGGCCAAGTATGATGTTGTTCTGACAACTTATTCAATTATCACCATGGAGGTCCCTAAGCAGCCAGTGGTCGACAAAGATGATGATGAGAAAGGAAATTCTGAAGATCATACTGTTCCATCAATGGTGTCAAATAAGAAAAGGAAATACCCTTCTAGTTCTAGTAAAAGTGGAAAGAAGGGATTTGATGGTGCATTGCTTGAGGCTGTTACTGGTCCTCTAGCCAAGGTGGCATGGTTTAGGGTCGTTTTGGATGAGGCCCAGAGTATAAAGAATCACAGAACTCAAGTTGCTAGGGCATGTTGGGGCCTTCGGGCAAAGCGTAGATGGTGTTTGTCGGGGACTCCTATCCAGAATGCAATTGATGATCTCTATAGTTACTTCAGATTTCTCAGATATGATCCTTTTGCTGTTTATCAATCATTCTGTTCTACAATTAAGATACCAATTAGCAAAAATCCAAGCAAAGGGTATAAAAAACTACAAGCTATCTTAAAGACAATAATGTTACGTCGGACCAAAGGTACACTTCTTGATGGAGAACCCATTATTTCCTTGCCACCAAAGTCTGTGGAGCTGAGAAAAGTGGAATTTTCACCAGAGGAGCGTGATTTTTATTCAAGACTAGAAGCTGATTCACGTGCGCAGTTTCAGGAATATGCGAATGCTGGAACTGTTAAGCAAAATTATGTCAACATCTTGCTAATGCTCTTACGCCTTCGACAAGCATGTGATCACCCTCTACTTGTTAGGCCCTACAATTCCAATTCTTTATGGAAATCTTCAGAGGTGGCTAAGAAGCTTCCTCGGGAGGAGCAAATATCTCTTTTGAATTCTTTGGAAGATAATTTGGCTCTTTGTCGCATCTGTAATGACCCTCCAGAAGATGCTGTTGTTGCATCTTGTGGTCATGTTTTCTGTAACCAGTGCATTTGTGAACATCTTAATGCCGACAACAATCAATGCCCTGCTACAAATTGCAAAGCTCGATTGAACTTGTCTTCAGTTTTCTCCAGAGCTACATTAAGCAGTTGTCTTTCTGACCAGACTTCTGATAGTTTGCCTGGTTGCTCTGACTCGGAAGTTGTAGGATTTGAACCTTGTTTTCAGAATCTGCGACATGATTCTTCAAAAATTAAGGCTGCTCTTGAGGTCTTACAATCTTTGTGCAAACCACAAGGCCATCCATCAAATAATATTTCTATGCAGACCACTTCTGGGGAAGGCAGTGCCAGCGTTGGGGACTCCTGTGTCGATCAGAAGGGGAAATCCTTCAGGGGTTCTCCTCAGAGTCCAAATCCGTCTGGGGATAGAAGCTCCAATGCTTCAATTTCTATGGTTGGAGGGAAAGCAATAGTGTTTTCTCAGTGGACAAGGATGCTAGATTTTCTTGAAGCTTGTCTTAAAGATTCTTCCATTCAGTACAGAAGGCTTGATGGAACAATGCCAGTTCTTGCAAGAGACAAAGCTGTCAAAGATTTTAATACTCTCCCTGAGGTATCAGTTATGATTATGTCCTTGAAAGCTGCCAGTCTTGGTCTTGACATGGTGGCGGCTTGCCATGTTCTTTTATTAGATTCTCTGTTAGTTCGCTGTCCTCCGTAATACAATTATAAAGTTCGACACTTTTTTTGCAGGTATCAGTTATGATTATGTCCTTGAAAGCTGCCAGTCTTGGTCTTAACATGGTGGCGGCTTGCCATGTTCTTTTATTAGACCTATGGTGGAATCCCACAACGGAAGATCAAGCAATTGATAGAGCACATCGCATTGGGCAAACTCGTCCTGTTACGGTTTTGCGATTAACCGTGAAAGATACGGTTGAAGATCGTATTTTAGCTCTACAGCAAAAGAAGCGACAGATGGTTTCCTCTGCATTTGGAGAGGATGAAACTGGTGGTCGCCAGAGTCGCCTCACCGTAGATGATTTGAATTACTTGTTCATGATGTGATTAGACATACACGCATACATACATACATACAGATGTGATTAGAAATACTTGTTCATTGGTCTTCTTCTTTTTCCTTGGGGGCAGATGTCATGGTTGGTTTGTTCATTTAGGTGGCAGCAAAAGCAGGGTGTTTTCTAAGTGATTGGAAGCCGTAGCATATGCACTCTTGATAGTTGACGTGAAGACTACGGGAATTGTCTTTACAGAATCAGATCAGTTGATTCATTCTTTAAATGGGAAATTTTTGGGTAAATCTGTTCTTGCATTTGTATAGGGTGTAGAGAGCAGCAAGACTAGTGTAGACAGGAAAGATAGAAAAATGAATGCAGTCTTTTTTGATGTAAA 4521 0.409 MADASVDYLRLANGDFDEFNAADNDVHIDLDTILRVLDENSDPSENSPDDTSLKNVSPGESGTRDNSQLQSGNSVFDYENENNGPSSPTCFSLHAFPGSRRDVNFVVESEGIYSTERAGSSGSQIPTHGGEPSFTEAYLNKMSNCGDSVYGSLWNGDNECKFKPIGDDVESGYASHSPMIGDFDLNFGHYGALDEDTTGGVSGIQQNDSCTSFEMTFMDADRSSHIATSADSTICQGSNVLSDYGDYHSSMLYCMGADGYLTNGVGYQICPTEEETMTNVKDEKVEFLADTACVSSNMHSAARGGIPFQDSKYISPDSGHSSFFSGNVLLEEKGSVQLSPCAPYKQSLDQAICVKSKRDKLITAYQDSSHCDDAEFNTGRDMKQLPGIFPVTGCQSFDFLKHEDKDTVIKSNGSHKYQDINYGNANKFLGTMGNLNLKALDESLPYPNASIASEKFGNIKSREEVNLFHHGSADSCFSKVGTEVFQRDFLERSHVEDDSDVCIIEDISHPAPTSHSANLGNSLSLSQGSTYGGSHTHMIANTRSKACDERYILRVLKDLSQPKSEVTPPDGLLAVPLLRHQRIALSWMVQKETSGLYCYGGILADDQGLGKTVSTIALLLKERPSTFRPCQNDQKGKLETLNLDADDDVLPENDGKNKIASTGCNMSSGCPMKNIDRAKGRPSAGTLIVCPTSVLRQWAEELNTKVTSKANLSVLVYHGSNRLKDPYELAKYDVVLTTYSIITMEVPKQPVVDKDDDEKGNSEDHTVPSMVSNKKRKYPSSSSKSGKKGFDGALLEAVTGPLAKVAWFRVVLDEAQSIKNHRTQVARACWGLRAKRRWCLSGTPIQNAIDDLYSYFRFLRYDPFAVYQSFCSTIKIPISKNPSKGYKKLQAILKTIMLRRTKGTLLDGEPIISLPPKSVELRKVEFSPEERDFYSRLEADSRAQFQEYANAGTVKQNYVNILLMLLRLRQACDHPLLVRPYNSNSLWKSSEVAKKLPREEQISLLNSLEDNLALCRICNDPPEDAVVASCGHVFCNQCICEHLNADNNQCPATNCKARLNLSSVFSRATLSSCLSDQTSDSLPGCSDSEVVGFEPCFQNLRHDSSKIKAALEVLQSLCKPQGHPSNNISMQTTSGEGSASVGDSCVDQKGKSFRGSPQSPNPSGDRSSNASISMVGGKAIVFSQWTRMLDFLEACLKDSSIQYRRLDGTMPVLARDKAVKDFNTLPEVSVMIMSLKAASLGLDMVAACHVLLLDSLLVRCPP 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00890 1262 SMART ring_2 1015 1053 IPR001841 -
Bach11g00890 1262 MobiDBLite consensus disorder prediction 1151 1170 - -
Bach11g00890 1262 Pfam Zinc finger, C3HC4 type (RING finger) 1015 1051 - -
Bach11g00890 1262 SUPERFAMILY RING/U-box 1011 1057 - -
Bach11g00890 1262 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 486 1254 - -
Bach11g00890 1262 Gene3D - 664 755 IPR038718 -
Bach11g00890 1262 SMART ultradead3 573 877 IPR014001 -
Bach11g00890 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 561 900 IPR027417 -
Bach11g00890 1262 FunFam SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 782 912 - -
Bach11g00890 1262 Pfam SNF2-related domain 598 977 IPR000330 GO:0005524|GO:0140658
Bach11g00890 1262 FunFam SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 667 755 - -
Bach11g00890 1262 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1167 1262 IPR001650 -
Bach11g00890 1262 ProSiteProfiles Zinc finger RING-type profile. 1015 1054 IPR001841 -
Bach11g00890 1262 CDD DEXDc_SHPRH-like 577 900 - -
Bach11g00890 1262 Pfam Helicase conserved C-terminal domain 1174 1254 IPR001650 -
Bach11g00890 1262 MobiDBLite consensus disorder prediction 46 83 - -
Bach11g00890 1262 MobiDBLite consensus disorder prediction 765 787 - -
Bach11g00890 1262 CDD SF2_C_SNF 1176 1254 - -
Bach11g00890 1262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 908 1255 IPR027417 -
Bach11g00890 1262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1000 1066 IPR013083 -
Bach11g00890 1262 MobiDBLite consensus disorder prediction 751 788 - -
Bach11g00890 1262 MobiDBLite consensus disorder prediction 1124 1141 - -
Bach11g00890 1262 MobiDBLite consensus disorder prediction 1124 1170 - -
Bach11g00890 1262 MobiDBLite consensus disorder prediction 39 83 - -
Bach11g00890 1262 Gene3D - 915 1257 IPR027417 -
Bach11g00890 1262 Gene3D - 781 912 IPR038718 -
Bach11g00890 1262 Gene3D - 551 638 IPR038718 -
Bach11g00890 1262 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 592 862 IPR014001 -
Bach11g00890 1262 ProSitePatterns Zinc finger RING-type signature. 1030 1039 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00890 Bach-Chr11 7669708 7678759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00890 501 1254 RAD5 or RAD16-like Gene Family AT1G61140 57.199 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach11g00890 SNF2_N 5.6e-68 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00890 - - lang:109332935 1382.08