Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00841 ATGGGATTGGGCAGTTATCAAAGATTGTTCTCTATCTTGATCCTATTTTGTTTTGCTCCCATAGACACCATAACATCAACTCAAATCCTCAAGGACCCCCATACTTTAACCTCTGATGGCGGTAACTACACGCTTGGATTCTTCAGCCCTGGGAACTCTACAAATCGCTATGTGGGAATATGGTACAAGTCCAAATCTGCTGTCATATGGGTGGCAAACAGAGACCAACCACTAAGAGATTCTTCTGGGATTGTTGCAATATCTGAGGATCGCAATCTTGTTGTGTTGAATGGAGAAAAACACGTAATTTGGTCATCTAATGTTACAAACATAACGTCCAATTCATCTGCACAGCTTCAAGATTCTGGAAACCTTGTCCTGCTAGATAACACTACAAAAAACATCTTATGGGAGAGTTTCAAGCATCCTTCTGATACCTTGTTGCCAAATATGAAACTTTCTAGCAACAGCAAAACAGGCGAGAGAGTAAAATTCACATCGTGGAAAAGCCCTTCTGATCCATCCAATGGGAACTTCTCTATCACCCTTGAGAGTCTAAATATTCCTGAGTTGTACATTTGGGATGGAACTCAGCCTTACTGGCGCAGCGGTCCATGGAATGGTCAACTCTTCACAGGAGTACAAAGAATGTCCTCCATGTATCTTGATGGTTTCACTCTAGGAAATGAAGGGGATGGAACTGTTTCTTTGATTTTTAATTATGTGTCTCAATTTGCTATTTTTGCTTTGAATTCACAAGGACAACTGGTGGAAAGAGATTGGAATTCTGAGAAGGAAGAATGGGAAGTTGATTTTACAGTTCAAAAATCTGACTGTGATGTTTATGATAAAACAAATGACAGCAGCATAATTGAAGAATTGTCAGAACAGGAGCTATTGCAATATGATTTTGAAGAGGTTGCAACTGCTACAAATAACTTTCATTCATCTAATAAACTTGGGCAGGGTGGTTTTGGTTCAGTATACAAGGGAAAATTGCAAGATGACAGGGAAATAGCAGCTAAAAGACTCTCTAGAGCATCTAGACAAGGGCTTCAGGAATTCAAGAATGAGGTCCTTGTGATTTCTAAGGTTCAACATCGTAATCTAGTAAGACTTCTTTGCTGCTGCTTGGAAAGAGATGAAAAGATCTTGATCTATGAATACATGCCAAATAAAAGTCTTGATGCAATTGTCTTTGGTTAG 1206 0.393 MGLGSYQRLFSILILFCFAPIDTITSTQILKDPHTLTSDGGNYTLGFFSPGNSTNRYVGIWYKSKSAVIWVANRDQPLRDSSGIVAISEDRNLVVLNGEKHVIWSSNVTNITSNSSAQLQDSGNLVLLDNTTKNILWESFKHPSDTLLPNMKLSSNSKTGERVKFTSWKSPSDPSNGNFSITLESLNIPELYIWDGTQPYWRSGPWNGQLFTGVQRMSSMYLDGFTLGNEGDGTVSLIFNYVSQFAIFALNSQGQLVERDWNSEKEEWEVDFTVQKSDCDVYDKTNDSSIIEELSEQELLQYDFEEVATATNNFHSSNKLGQGGFGSVYKGKLQDDREIAAKRLSRASRQGLQEFKNEVLVISKVQHRNLVRLLCCCLERDEKILIYEYMPNKSLDAIVFG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00841 401 SUPERFAMILY Protein kinase-like (PK-like) 287 399 IPR011009 -
Bach11g00841 401 Pfam S-locus glycoprotein domain 201 285 IPR000858 GO:0048544
Bach11g00841 401 ProSiteProfiles Bulb-type lectin domain profile. 21 140 IPR001480 -
Bach11g00841 401 ProSiteProfiles Protein kinase domain profile. 314 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00841 401 SMART blect_4 27 143 IPR001480 -
Bach11g00841 401 Gene3D Phosphorylase Kinase; domain 1 275 389 - -
Bach11g00841 401 Pfam Protein tyrosine and serine/threonine kinase 316 397 IPR001245 GO:0004672|GO:0006468
Bach11g00841 401 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 174 IPR036426 -
Bach11g00841 401 Gene3D - 17 141 IPR036426 -
Bach11g00841 401 CDD B_lectin 27 143 IPR001480 -
Bach11g00841 401 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 287 - -
Bach11g00841 401 Pfam D-mannose binding lectin 68 169 IPR001480 -
Bach11g00841 401 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 140 - -
Bach11g00841 401 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Bach11g00841 401 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 279 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00841 Bach-Chr11 7152069 7154159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00841 272 401 Receptor kinase-like Gene Family AT4G23160 50.769 2.44e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bach11g00841 B_lectin 5.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00841 - - qsa:O6P43_012540 364.77