LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach11g00839	CTTGTCTACCTATTAATCTAAAACCCCAAAAAGAAAATGTCTTGGACATGAAGGAACCAAACACTCCCATCTACTTTCACAAAAGCAAGCTTTGCCTTTGCTCTGCAAAATGGGAAGCTTCACTAACCTCAGCTTCTTCATCATACTCACTCTCATCCCAACAATCTCAATTGCATTAGATACCTTGACAGCATCCCAAATTCTCAGAACCAATGAAACCCTTTTGTCATCCAATCAAGTTTTTGAATTGGGTTTCTTCAACATTTCCGATTCCAAATGGTATTTGGGTGTTTGGTACAAGAGCATTTCTCAGAAAACTTATGTTTGGGTTGCAAACAGAGATGCCCCAATTAAAAGTTCCACCGGGGTTCTCAAGATCCGAGACAAGGGAAACATCGTTATCTCTGATCAAGCTGGGAACTTTATATGGAACTCGACTCAAACAGCATCTAGAAACCCAGTTCTCAAGCTCTTGAATAATGGGAATTTGATTCTTATAGAAGAAACTGAGAAAGACCCATCAAAATTCCTCTGGCAAAGCTTTGATTACCCAACGGATACTCTGTTACCAGGCATGAAACTGGCGGTGAACCTAGACACAGGCATGGAGAGGCACATAACATCGTGGAAAAGTGAAGATGATCCTTCAACAGGACACATCTCCTTCAAGCTAGAATACCGTGGACTCCCAGAAATCTTCTTGTGGAACGATGGGAAAATTAAGTATCGAAGTGGGCCTTGGAATGGTTTCAGATTCAGTGGGGTACCCGAAATGCAACCCAGCACAGATTCCATCAAGTTCATGTTTGTTGCAAACGAACACGAGGTGTATTATACCTTCTCGATTGGAAACGAGTCCTTGTTTTCGAGACTTTCCGTGAATCCAAACGGCGAGCTTCAACGAATGACATGGATAGAAAGCAGCAGAATTTGGAACAAATTCTGGTATGCACCCAAAGATCAATGCGATGATTATAAAAACTGTGGTGCTTATGGTATCTGTGACTCGAATCTGTCACCTGTTTGCAAGTGTATGCATGGGTTCAGGCCAAGGAATCAGCTGGCATGGAATCTGAGAGATGGAACTGATGGGTGTGTGAGGAACAAGCAATTGGATTGTGGGACTGACAAGTTTTTGAAGCTGCAGTATGTGAAATTGCCAGAGACCACGACTGTGTTCCTGAACAGAAGTATGAGCCTGGTGCAGTGTGCAGATTTGTGCTATAAGAATTGTTCTTGCAATGCTTATGCTAATGTTGAGATCAGTAATGGAGGGACTGGGTGTGTGATGTGGCATGATGAACTGATAGATATGAGACAGTATACTGAAGGTGGTGGGCAAGATCTCTATGTCAGATTAGCAGCTTCTGATGTAGATGATATAGGATCTGCTGGTGGTTCTCACAAGCCAAAGAACATATTGAAGGTTGTAGGCATTTCAGTTGCTGCAGCTATTGTACTTCTGGCATTGGGTTTCTATTTCTTATGCAAGAAGAAGAAATTGAAAAGGATATTAACAGGGAAGACAGAACAGAGAGATCCAGGTTCTATTGAGAGAAGTCAGGACTTGCTGTTGACTGAGGTGGTATTTTCAAGTAATAGAGAACAATCTGCTGACAGGAAAATAGAGGAACTAGAGTTACCACTTTTTGACTTCAATACTATAACAATGGCTACAAACAATTTCTCTGAAGAAAATAAGCTGGGGCAAGGTGGCTTTGGTATTGTTTACAGGGGTAGGTTGGTGGAAGGTCAAGAAATTGCTGTGAAGAGGCTATCAAGAAACTCTGGGCAAGGAATTGAAGAATTCAAGAACGAGGTCAAGTTGATTGTCAAGCTTCAACACCGGAATCTTGTTCGCCTGTTTGGCTGCTGCGTTGAGATGGAAGAGAAGATGCTGGTTTATGAGTACATGGAAAACAAAAGCCTTGATTCCTTTTTATTTGATAAAGCAAAAAGATCTTTACTTGATTGGAAAAGGCGCTTCAATATTATATGTGGAATTGCTAGAGGACTTCTTTATTTACATCAAGATTCGAGATTGAAGATTATTCATAGGGATCTCAAGACAAGTAACATTTTATTAGATAAAGAAATGAATCCAAAGATATCAGATTTTGGGATGGCTAGAATTTTTGGCACGGACCAAACAGAAGCTAATACACTGAGAGTTGTTGGAACATATGGGTATATGTCTCCTGAATATGCCATGGATGGAATTTTCTCAGTGAAATCAGATGCATTTAGTTTTGGAGTTCTAGTGTTAGAGATTATAAGTGGCAAGAAGAACAGAGGATTTTATCATGCAAATAATGATTTGAATCTTCTGGGGCATGCTTGGAGGCTGTGGCAAGAAGGAAATGCTTTGGAACTAATAGATTCATCATTTGGTGATTCATATTCACCACCTGAAGTTCTTAGATGCATACAAGTGGGGCTCTTATGCGTCCAAGAGCGCGCAGAAGACAGGCCAACAATGTCTTCTGTGGTCCTGATGCTGAGCAGTGAAAATGCAACAATGCCACAACCTAAAATCCCTGGGTTTTGCCTTGGAAGGGCTCCTAATGAGACTGATTCCTCTTCAAGTAAGAAAGAAGAATCATGCTCCGTGAACCAAGTCACAGTCACAATGCTAGATGCTAGGTAGTGAAAGAATTAAATGGCCAATCTGTCAAAGTT	2679	0.4102	MFVANEHEVYYTFSIGNESLFSRLSVNPNGELQRMTWIESSRIWNKFWYAPKDQCDDYKNCGAYGICDSNLSPVCKCMHGFRPRNQLAWNLRDGTDGCVRNKQLDCGTDKFLKLQYVKLPETTTVFLNRSMSLVQCADLCYKNCSCNAYANVEISNGGTGCVMWHDELIDMRQYTEGGGQDLYVRLAASDVDDIGSAGGSHKPKNILKVVGISVAAAIVLLALGFYFLCKKKKLKRILTGKTEQRDPGSIERSQDLLLTEVVFSSNREQSADRKIEELELPLFDFNTITMATNNFSEENKLGQGGFGIVYRGRLVEGQEIAVKRLSRNSGQGIEEFKNEVKLIVKLQHRNLVRLFGCCVEMEEKMLVYEYMENKSLDSFLFDKAKRSLLDWKRRFNIICGIARGLLYLHQDSRLKIIHRDLKTSNILLDKEMNPKISDFGMARIFGTDQTEANTLRVVGTYGYMSPEYAMDGIFSVKSDAFSFGVLVLEIISGKKNRGFYHANNDLNLLGHAWRLWQEGNALELIDSSFGDSYSPPEVLRCIQVGLLCVQERAEDRPTMSSVVLMLSSENATMPQPKIPGFCLGRAPNETDSSSSKKEESCSVNQVTVTMLDAR	614

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach11g00839	614	Gene3D	Transferase(Phosphotransferase) domain 1	371	577	-	-
	Bach11g00839	614	ProSiteProfiles	Protein kinase domain profile.	295	578	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach11g00839	614	CDD	STKc_IRAK	301	566	-	-
	Bach11g00839	614	Pfam	Protein tyrosine and serine/threonine kinase	298	564	IPR001245	GO:0004672\|GO:0006468
	Bach11g00839	614	ProSitePatterns	Protein kinases ATP-binding region signature.	301	323	IPR017441	GO:0005524
	Bach11g00839	614	Pfam	Domain of unknown function (DUF3403)	568	614	IPR021820	GO:0004674
	Bach11g00839	614	CDD	PAN_AP_plant	103	187	-	-
	Bach11g00839	614	SMART	ntp_6	106	186	IPR003609	-
	Bach11g00839	614	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	416	428	IPR008271	GO:0004672\|GO:0006468
	Bach11g00839	614	SMART	serkin_6	295	566	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bach11g00839	614	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	50	593	-	-
	Bach11g00839	614	Gene3D	Phosphorylase Kinase; domain 1	269	370	-	-
	Bach11g00839	614	Pfam	PAN-like domain	106	171	IPR003609	-
	Bach11g00839	614	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	260	370	-	-
	Bach11g00839	614	SUPERFAMILY	Protein kinase-like (PK-like)	275	566	IPR011009	-
	Bach11g00839	614	Pfam	S-locus glycoprotein domain	3	84	IPR000858	GO:0048544
	Bach11g00839	614	Pfam	Receptor serine/threonine kinase	251	285	IPR022126	GO:0004674
	Bach11g00839	614	FunFam	G-type lectin S-receptor-like serine/threonine-protein kinase	371	574	-	-
	Bach11g00839	614	ProSiteProfiles	PAN/Apple domain profile.	106	187	IPR003609	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach11g00839	Bach-Chr11	7076316	7082407	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach11g00839	283	614	Receptor kinase-like Gene Family	AT4G11530	60.237	1.46e-141	425

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bach11g00839		PK_Tyr_Ser-Thr	4.5e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach11g00839	-		-	gmx:106799702	959.903