Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00837 ATGGCGACTCAGCTCCCAGACGACTTCAAGTGTCCGATTTCGTTAGAGATAATGTCCGACCCGGTTATCCTCTCGTCGGGTCACACATTTGACCGAGCCTCAATCCAACGGTGGCTCAACGCCGGTCACCGGACCTGTCCAATCACGAAGCTGCCCCTCCCGGACCACCCTTCCCTCATCCCCAACCACGCTCTCAGAAGCTTGATTTCAAACTACGCTCTCACTTCCCCTCTGAAACATCAGCCTCCTCCTCAACCCGAAACCCTGATCTCCGCGCTTCTCTCCCGTTCATCTTCCCTCGACTCCAAAATCGAGTCGCTGCGCCAGCTCACCCGGCTTGCAAAACGCGACTCGGTGTTCGGGCGGCGGTTGACTGAGTCAGGGGTCGTGTCGGCAGTGCTCAACTGTGTTGACTCGGATGATCCCGGTCTTCAAGAGAAAGCTCTTTCCTTGCTGCTGAATCTTAGTCTAGACGACGATAACAAGGTTGGTTTGGTGGCGGAAGGCGTGATTGGTCGTCTTGTGGCGGTTTTGCTCGGTGGGTCCCCGGATTGCCGAGCGGTGGCTGCAACTATGCTGACGAGTTTGGCGGTTGTGGAAGTCAACAAGGTCACAATTGGTCGGTACCCTTACGCAATAGGAGCTTTGGTTTCGCTACTCAGAGATGGTAAAGGCAGAGAGAGGAAAGAAGCTGCCACAGCACTATATGCTATTTGCTCTTTTCCTGATAATCGGAGAAGAGCTGTGGAATGTGGGGCGGTCCCGATTTTGCTTAGAAGTGTTGATACTGGGCTTGAAAGGGCCGTTGAAGTTCTGGGTATCTTGGCTAAGTGTAAGGAAGGGAGGAAGGAAATGGAAATGTATCATGGCTGTATACAGATTCTAGTTAGAGTATTGAAGAATGGAAGCTCTAGAGGAGTTCAATATGCCCTGTTGGCACTCAACTCCCTTTGTTGTTATAGTGAACATATGAACTTAGAGGCGATAAAAGAAGGGATTTGTGGGACTTGTATGGAGTTACTGGAGGATGATAACGAGAAAATAAGGAGAAGTTCTTCCAGTTTGATTCAGGTTCTGGGTGGCAACCATGCAATGAGCTGA 1101 0.5095 MATQLPDDFKCPISLEIMSDPVILSSGHTFDRASIQRWLNAGHRTCPITKLPLPDHPSLIPNHALRSLISNYALTSPLKHQPPPQPETLISALLSRSSSLDSKIESLRQLTRLAKRDSVFGRRLTESGVVSAVLNCVDSDDPGLQEKALSLLLNLSLDDDNKVGLVAEGVIGRLVAVLLGGSPDCRAVAATMLTSLAVVEVNKVTIGRYPYAIGALVSLLRDGKGRERKEAATALYAICSFPDNRRRAVECGAVPILLRSVDTGLERAVEVLGILAKCKEGRKEMEMYHGCIQILVRVLKNGSSRGVQYALLALNSLCCYSEHMNLEAIKEGICGTCMELLEDDNEKIRRSSSSLIQVLGGNHAMS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00837 366 Gene3D - 84 209 IPR011989 -
Bach11g00837 366 SMART arm_5 241 277 IPR000225 GO:0005515
Bach11g00837 366 SMART arm_5 158 198 IPR000225 GO:0005515
Bach11g00837 366 SMART arm_5 278 319 IPR000225 GO:0005515
Bach11g00837 366 SMART arm_5 117 157 IPR000225 GO:0005515
Bach11g00837 366 FunFam RING-type E3 ubiquitin transferase 4 76 - -
Bach11g00837 366 Gene3D - 210 365 IPR011989 -
Bach11g00837 366 Pfam U-box domain 6 73 IPR003613 GO:0004842|GO:0016567
Bach11g00837 366 CDD RING-Ubox_PUB 6 55 IPR045210 -
Bach11g00837 366 SMART Ubox_2 8 72 IPR003613 GO:0004842|GO:0016567
Bach11g00837 366 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 81 IPR013083 -
Bach11g00837 366 PANTHER U BOX DOMAIN-CONTAINING 5 357 - -
Bach11g00837 366 ProSiteProfiles U-box domain profile. 4 79 IPR003613 GO:0004842|GO:0016567
Bach11g00837 366 SUPERFAMILY RING/U-box 3 78 - -
Bach11g00837 366 SUPERFAMILY ARM repeat 87 360 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00837 Bach-Chr11 7061775 7062875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00837 1 361 U-box Gene Family AT4G21350 62.162 1.62e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00837 - - qsa:O6P43_012528 553.903