Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00784 ATGGGGAGAGGGAAGATTGAAATCAAAAGGATTGAAAGCTCCACAAGCAGGCAAGTGACTTTTTCAAAACGAAGAAATGGGCTACTCAAGAAAGCTAGGGAGCTATCCATTCTTTGTGATGCTGAAATTGGAGTTATAATCTTCTCCAGCACTGGCAGACTCTATGATTTTGCTAGCTCCAGCATGAAATCGATTATTGAACGCTACAATAACATGCATGGGGAAGATCATCATATCAATCGGCTATGTAATCCAGCTTCTGAAGTCAAGTTTTGGCAAAGGGAGGCATCAAGTTTGAGACAGCAATTGCATCATGTGCAACAATGCAACAGGCAATTGATGGGCCATGAACTATCAGGTCTGAGCATTAAAGATCTGCGGAATTTAGAAAACCAATTGGATATGAGTTTAAGGAGCATCCGCGTGAGGAAGGACCAAGTTCTTTATGATGAAATAGAAAAACTCAGCTGCAAGGCATGTGAAGCAAGCGGTGCAGAGGCAAACAATAGTTGTAATCTTTATATGATCGAAGCTCAGCCTGCAGCCACTAAACAATATAATACCGGCAAAACCAGTAAAACTAAGATGGTGGAACGGTGCTATTTCCCTTATATATGCTACTCAACTTTGGTGTTTAATGAGTGTGAAGCTGTGGACAAAACAAACTGCGCTGAATGCGATAGAGATTTCAGTTTCCGGTTCATTGGCATTCTGTGTGGTTCACCTGTTTGGCATTCAGGTCTGGAAATGGAGGATAAGTCTTCTGAAGAAGTGATTTCAGACAATGCATCTCAAAACCAGGAAACTCTTGATGAAGTGCTTTCACGGCACAGGAAAGAGATATCAGAGCTGCAGAAGAGGGAAAATGAGCTGAAAAAGTCAGCAGCAAGAGGTAGCAAGGCTGAACAGAAAGCTAAGAAGAAGCACGTGGAGGAAGAAATTTCGCAACTTTCGGCTAAGCTTAAAGAGAAACAAGCCCAAGAACTTGCCTCATTAGGCTATAGTGGTAGTAATGGAAATGAAAAGAGCAATTTGGACAGTTTGGTAAAGGCCATAGCTGGAGTATCTGTTACCAGTCAACCTGACCGTACAAAAGCCAGCAAGGCCAAACAGAGGCGTAACAGAAGAGCTCAACAAGAAGCAGAAAGGGAGGAAAGGATCCAAGCAGAGCAGAGCGACATTATAAGTGACCGCTTGATTGAAAATGAGAAACTGGAAAGAAAGCTTGAACCTCTTGGTTTGACTGTTAATGAAATAAAGCCAGATGGGCATTGCCTCTATAGAGCTGTTGAGGATCAACTGGCCCTCCTCTCTGGGGCTTCTTCTCCTTATACGTACCAAGAACTTCGGGCAATGGCAGCTGCTTACATGAGAAACCATACATCTGATTTCCTTCCATTTTTCCTGTCTGAGAATTTGTTAGAAGATTATTCTGATGAATCTCTCACCCTTAAGTTTGAAAATTACTGTAAAGAAGTGGAGTCTACAGCTATATGGGGAGGACAACTAGAGCTTGGCGCCCTGACTAAGTGCCTGAAAAAGCATATTGTGATATTTTCAGGGTCCTTCCCTGATGTGGAGATGGGGAAAGAGTACAAATCTGATCATGATGATGCTGCTATATCTCATGCAAGTATTATGCTTTCATATCATAAACATGCTTTTGGGCTCGGTGAGCATTATAATTCCGTGGTCCCAACCATAATCAATTAGGCATATCATAAGAATGCTTACCAATACCATGGCTGTCTGGGTTATCTTTACGCTGAAGGTGTTATTCTTGACACTGGAGAATTCTGATTTAGG 1806 0.4214 MGRGKIEIKRIESSTSRQVTFSKRRNGLLKKARELSILCDAEIGVIIFSSTGRLYDFASSSMKSIIERYNNMHGEDHHINRLCNPASEVKFWQREASSLRQQLHHVQQCNRQLMGHELSGLSIKDLRNLENQLDMSLRSIRVRKDQVLYDEIEKLSCKACEASGAEANNSCNLYMIEAQPAATKQYNTGKTSKTKMVERCYFPYICYSTLVFNECEAVDKTNCAECDRDFSFRFIGILCGSPVWHSGLEMEDKSSEEVISDNASQNQETLDEVLSRHRKEISELQKRENELKKSAARGSKAEQKAKKKHVEEEISQLSAKLKEKQAQELASLGYSGSNGNEKSNLDSLVKAIAGVSVTSQPDRTKASKAKQRRNRRAQQEAEREERIQAEQSDIISDRLIENEKLERKLEPLGLTVNEIKPDGHCLYRAVEDQLALLSGASSPYTYQELRAMAAAYMRNHTSDFLPFFLSENLLEDYSDESLTLKFENYCKEVESTAIWGGQLELGALTKCLKKHIVIFSGSFPDVEMGKEYKSDHDDAAISHASIMLSYHKHAFGLGEHYNSVVPTIIN 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00784 570 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach11g00784 570 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach11g00784 570 Coils Coil 367 387 - -
Bach11g00784 570 MobiDBLite consensus disorder prediction 373 388 - -
Bach11g00784 570 Pfam OTU-like cysteine protease 420 561 IPR003323 -
Bach11g00784 570 ProSiteProfiles OTU domain profile. 414 567 IPR003323 -
Bach11g00784 570 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 158 - -
Bach11g00784 570 SUPERFAMILY SRF-like 2 80 IPR036879 GO:0003677|GO:0046983
Bach11g00784 570 Gene3D - 400 567 - -
Bach11g00784 570 FunFam Cysteine proteinases superfamily protein 400 566 - -
Bach11g00784 570 CDD MADS_MEF2_like 2 77 IPR033896 GO:0000977|GO:0045944
Bach11g00784 570 Coils Coil 300 327 - -
Bach11g00784 570 MobiDBLite consensus disorder prediction 287 311 - -
Bach11g00784 570 FunFam MADS-box transcription factor MADS-MC 13 83 - -
Bach11g00784 570 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach11g00784 570 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach11g00784 570 ProSiteProfiles K-box domain profile. 89 182 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach11g00784 570 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach11g00784 570 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach11g00784 570 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach11g00784 570 Gene3D - 14 88 IPR036879 GO:0003677|GO:0046983
Bach11g00784 570 Coils Coil 267 294 - -
Bach11g00784 570 Pfam K-box region 87 158 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach11g00784 570 CDD OTU_plant_OTU5-like 405 565 - -
Bach11g00784 570 MobiDBLite consensus disorder prediction 359 388 - -
Bach11g00784 570 SUPERFAMILY Cysteine proteinases 401 566 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00784 Bach-Chr11 6533288 6540991 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00784 1 159 MADS-box Gene Family AT4G37940 64.151 1.06e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach11g00784 OTU 6.4e-30 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00784 K18342 - gmx:100819977 483.026