Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00783 TGTCAAAGTAGAAAATCTGTGAAAAAGCCCTAGGATTTTGAACTTCGACCATGGGGAGAGGGAAGATTGTGATTCGAAGGATTGACAATTCGACTAGCCGGCAAGTCACTTTCTCCAAGAGGAGGAATGGATTGCTGAAGAAAGCCAAAGAGCTATCGATTCTTTGCGACGCAGAAGTTGGATTGATTGTCTTCTCCAGCACCGGCAAGCTTTACGAGTATGCAAGCACAAGCATGACAACAGTCATCGAACGCTACAACAAGCTAAAAGAGGAGGAACATCAACTTATGAATCCCGCCTCAGAAATCAAGTTTTGGCAGAGGGAAGCAGCAAGCTTGAGGCAACAACTACAGTACTTGAAAGAATGCCAGAGGCAATTGATGGGTGAAGAACTATCTGGCTTGGGCGTCAAAGAACTACAAAATCTGGAAAACCAGCTTGAGATGAGTTTAAAGGGTGTTCGCATGAAAAAGGATCAAATTTTAAATGATGAGATCAAACAACTACACCAAAAGGGAAATCTCATTCATCAAGAAAATGTAGAACTCTATAAAAAGCTAGACCTCTTCCGTAAGGAAAACATTGAACTGCAGAAGGTTTATGAAGCAAGGAAATCAACCGAAGGAAAGACATCCAAATCTTCATGCACCATCAAAGGACAATACGATCTACATGTTCCTATCAGTCTCCAGCTAAGCCAGCCAGAGCCTCCGTACAGTGAACCATCTACCCAGGCAATGAATCTTGGGTTACAGCTGCAATAGCAAAACAGCTTGACAATCACGGATGGTAGTCTGACAACAAGCTGTCAACCACTTAACCCAAAGAAAGATCAAGATTGTGAGAGTGAGATCTTGTACAACTACAACATCGGTTATATTCAGCACTACCCCTCAATACAAAATTGGTATGACATGTTGTATCAAGAAGCTTTACAGTTGCAGTTAACAGATCAGACATACAGACTACATCTGTATATTGTATGCAATAAGAGTATCATCAAATATGCTGAGTATTCTTTCAAATATTTCTACTTCTATTAAGATCAAA 1050 0.4067 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIVFSSTGKLYEYASTSMTTVIERYNKLKEEEHQLMNPASEIKFWQREAASLRQQLQYLKECQRQLMGEELSGLGVKELQNLENQLEMSLKGVRMKKDQILNDEIKQLHQKGNLIHQENVELYKKLDLFRKENIELQKVYEARKSTEGKTSKSSCTIKGQYDLHVPISLQLSQPEPPYSEPSTQAMNLGLQLQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00783 237 ProSiteProfiles K-box domain profile. 86 176 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach11g00783 237 FunFam MADS-box transcription factor MADS-MC 13 85 - -
Bach11g00783 237 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
Bach11g00783 237 CDD MADS_MEF2_like 2 78 IPR033896 GO:0000977|GO:0045944
Bach11g00783 237 PANTHER SERUM RESPONSE FACTOR HOMOLOG 3 182 - -
Bach11g00783 237 Gene3D - 13 92 IPR036879 GO:0003677|GO:0046983
Bach11g00783 237 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach11g00783 237 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach11g00783 237 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach11g00783 237 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach11g00783 237 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach11g00783 237 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach11g00783 237 Pfam K-box region 85 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach11g00783 237 SUPERFAMILY SRF-like 2 90 IPR036879 GO:0003677|GO:0046983
Bach11g00783 237 MobiDBLite consensus disorder prediction 217 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00783 Bach-Chr11 6502314 6513469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00783 1 236 MADS-box Gene Family AT2G14210 63.025 2.53e-93 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach11g00783 K-box 1.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00783 K09264 - gmx:100808145 361.303