Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00762 ATGACGAGAAGAAAGATACAGATCAAGAAGATCGACGACATAACTGCAAGGCAGGTGACTTTCTCTAAGAGGAGGAGAGGGCTTTTCAAGAAGGGGCAGGAGCTGTCAACACTTTGTGATGCTGAGATTGCTCTGTTGGTCTTTTCTAGTACTGGTAGGCTCTTTGAGTATTCCAGTTCAAGTATGCAGGATGTAATTGAAAAGCATTGTCTGCTCACAGGGAACTTCGAGAAATTAGATCAGCAATCTCTTGCGCAGAAGATAGAGAGTAGCAATTATGATATGCTGAACAAGGAGATGCAAGAGAAAACTTTAGAATTAAGCAAATTGAAGGGAGAAGAACTGCAAGGACTGACGTTTAAAGAACTGCAAAAGCTAGAAGATCTACTAAGCACACGCCTGAACCGTGTTGCAAAAGCAAGGGCAGGGAGCCCAGTTATTGGAAGTAAACAAGAAGTTAAAACAGGCGGTTTTATGCAGCTTTATGCAGAGTCCCTTGCACGTTTTCAAGGAGGCTCACCTTACATATATCCACTATATGGATTGAGAGAGTTGCCTCAGGCATTTGCACGGTTGAGTGCAGTGTATGGTGGAACTTACATGCTCAATACGCCAGAATGCAAGGAGAGAGCAAAATGCAAGAAAGTTGTGTGTGATCCATCGAATCTTCCTGATAAGGTCCAAAAGGTTGGAAAGGTTGCACGTGTCATATGCATTATGAGCCATCCTATTCCAGACACCAATGATTCTCACTCAGCACAGGTCATTCTGCCACAGAAGCAACTTGGCCATGAATCAGATATCTTCCTGATTCTTGTTGCAGGTCATATACTCACAATGTTGCACCCAAAGGGAAAATATATTGCCTTTGTTACAACAGAAGCAGAGACTGATCAACCTGAGGTGGAATTGAAGCCTGGTGTTGACCTTCTTGGACCAGTGGATGAGATATTCTATGATCTTCATGGTTCTACTGCATTTAAAATTATATTTCTGGTCGACTGTTGTAGTTTCCTCCTTGTACAGAATGACATCAAAATGGCGGTCAATGTTGTCCCTGATTTTATTCAGTATGGGGATATATACTCCACCCAGTCTCGGTTAATATTTTCATGCGTCTCTGTAAGACTTGAAGGATCAACAGTTAATGGAAATAGGACTGCTTTTGAGTTGGAGTGGAAAATTGAAGATATCATAAAGATTGAGTCATATTGGTGTGGAAAGGTTGAAACAGCCATGATCAACTTCCTTTTGAAACCGGATGATTCTAGGGAATCTGGAAAGACAAACCAAAATCGAGGTTTCACTGCTTGA 1314 0.4178 MTRRKIQIKKIDDITARQVTFSKRRRGLFKKGQELSTLCDAEIALLVFSSTGRLFEYSSSSMQDVIEKHCLLTGNFEKLDQQSLAQKIESSNYDMLNKEMQEKTLELSKLKGEELQGLTFKELQKLEDLLSTRLNRVAKARAGSPVIGSKQEVKTGGFMQLYAESLARFQGGSPYIYPLYGLRELPQAFARLSAVYGGTYMLNTPECKERAKCKKVVCDPSNLPDKVQKVGKVARVICIMSHPIPDTNDSHSAQVILPQKQLGHESDIFLILVAGHILTMLHPKGKYIAFVTTEAETDQPEVELKPGVDLLGPVDEIFYDLHGSTAFKIIFLVDCCSFLLVQNDIKMAVNVVPDFIQYGDIYSTQSRLIFSCVSVRLEGSTVNGNRTAFELEWKIEDIIKIESYWCGKVETAMINFLLKPDDSRESGKTNQNRGFTA 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00762 437 SUPERFAMILY FAD-linked reductases, C-terminal domain 227 322 - -
Bach11g00762 437 Coils Coil 93 113 - -
Bach11g00762 437 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 157 174 - -
Bach11g00762 437 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach11g00762 437 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach11g00762 437 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach11g00762 437 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach11g00762 437 Pfam GDP dissociation inhibitor 157 322 IPR018203 GO:0005092|GO:0007264
Bach11g00762 437 SUPERFAMILY SRF-like 2 74 IPR036879 GO:0003677|GO:0046983
Bach11g00762 437 PRINTS Rab GDI/REP protein family signature 181 202 IPR018203 GO:0005092|GO:0007264
Bach11g00762 437 PRINTS Rab GDI/REP protein family signature 163 180 IPR018203 GO:0005092|GO:0007264
Bach11g00762 437 PRINTS Rab GDI/REP protein family signature 42 58 IPR018203 GO:0005092|GO:0007264
Bach11g00762 437 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach11g00762 437 Gene3D - 175 231 IPR036188 -
Bach11g00762 437 Gene3D - 13 94 IPR036879 GO:0003677|GO:0046983
Bach11g00762 437 PANTHER RAB GDP-DISSOCIATION INHIBITOR 158 321 IPR018203 GO:0005092|GO:0007264
Bach11g00762 437 CDD MADS_MEF2_like 3 69 IPR033896 GO:0000977|GO:0045944
Bach11g00762 437 FunFam Transcription factor, MADS-box 13 83 - -
Bach11g00762 437 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach11g00762 437 PRINTS Rab GDI protein signature 215 229 IPR000806 GO:0005093|GO:0015031
Bach11g00762 437 PRINTS Rab GDI protein signature 285 303 IPR000806 GO:0005093|GO:0015031
Bach11g00762 437 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 232 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00762 Bach-Chr11 6103818 6113975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00762 1 173 MADS-box Gene Family AT2G22540 52.299 5.90e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach11g00762 GDI 3.5e-61 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00762 K17255 - tcc:18608208 265.774