Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00761 ATGACGAGAAGAAAGATACAGATCAAGAAGATCGACGACATAACTGCAAGGCAGGTGACTTTCTCTAAGAGGAGGAGAGGGTTTTTCAAGAAGGCACAGGAGCTGTCAACACTTTGTGATGCTGAGATTGCTCTATTGGTCTTTTCTAGTACTGGTAGGCTCTTTGAGTATTCCAGTTCAAGTATGCAGGATGTAATTGAAAAGCATTGTCTGCTCACAGGGAACTTCGAGAAATTAGATCAGCGATCTCTTGCGCAGAAGATAGAGAGTAGCAATTATGATATGCTGAACAAGGAGATGCAAGAGAAAACTTTAGAATTAAGCAAATTGAAGGGAGAAGAGCTGCAAGGACTGACGTTTAAAGAACTGCAAAAGCTAGAAGATCTACTAAGCACACGCCTGAACCGTGTTGCAAAAGCAAGGAATGAAAGAGTTCACAGAGATATCAGTGTCCTCAAGAAAAAGGGAGCCCAGTTATTGGAAGTAAACAAGAAGTTAAAACAGGTTACCTATCCCCGACTTAAATCAAAGTTTGAGGGGCAGAGATTAACGATGGATGAAGAGTACGATGTAATAGTCCTCGGAACAGGACTCAAGGAATGCATACTCAGTGGCCTTCTCTCAGTTGATGTCCGCAGATTTTATGCAGAGTCCCTTGCACGTTTTCATGGAGGCTCACCTTACATATATCCACTCTATGGATTGAGAGAGTTGCCTCAGGCATTTGCACGGTTGAGTGCAGTGTATGGTGGAACTTACATGCTCAATACGCCAGAATGCAAGGTGGAGTTTGACGAAAATAGAAAAGCCATTGGTGTGACATCTGAAGGAGAGACAGCAAAATGCAAGAAAGTTGTGTGTGATCCATCGTATCTTCCTGATAAGGTCCAAAAGGTTGGAAAGGTTGCACGTGTCATATGCATTATGAGCCATCCTATTCCAGACACCAATGATTCTCACTCAGCACAGGTCATTCTGCCACAGAAGCAACTTGGCCATGAATCAGATATGTATCTCTTCTGCTGCTCATGTACTCACAATGTTGCACCCAAAGGGAAATACATTGCCTTTGGTACAACAGAAGCAGAGACTGATCAACCTGAGGTGGACTTGAAGCCTGGTGTTGACCTTCTTGGACCTGTAGATCAGATATTCTATGATCTTCATGGTTCTACTGCATTTAAAATTAATGACATCAAAATGGCAGTCAATGTTGTCCTTGATTTTATTCAGTATGGGGATATATACTGCACCCAGTCTCGGTTAATATTTTCATGCGGCTCTGTAAGACTTGAAGGTTCAACAGTTAATGGAAATAGGACTGCTTTTGAGTTGGAGTGGAAAATTGAAGATATCATAAAGATTGAGTCATATTGGTGTGGACAGGTTGAAACAGCCATGATCAACTTCCTTTTGAAACCGGATGATTCTAGAGAATCTGGAAAGACAAACCAAAATCAAGGTCTCACTGCTTGA 1476 0.4194 MTRRKIQIKKIDDITARQVTFSKRRRGFFKKAQELSTLCDAEIALLVFSSTGRLFEYSSSSMQDVIEKHCLLTGNFEKLDQRSLAQKIESSNYDMLNKEMQEKTLELSKLKGEELQGLTFKELQKLEDLLSTRLNRVAKARNERVHRDISVLKKKGAQLLEVNKKLKQVTYPRLKSKFEGQRLTMDEEYDVIVLGTGLKECILSGLLSVDVRRFYAESLARFHGGSPYIYPLYGLRELPQAFARLSAVYGGTYMLNTPECKVEFDENRKAIGVTSEGETAKCKKVVCDPSYLPDKVQKVGKVARVICIMSHPIPDTNDSHSAQVILPQKQLGHESDMYLFCCSCTHNVAPKGKYIAFGTTEAETDQPEVDLKPGVDLLGPVDQIFYDLHGSTAFKINDIKMAVNVVLDFIQYGDIYCTQSRLIFSCGSVRLEGSTVNGNRTAFELEWKIEDIIKIESYWCGQVETAMINFLLKPDDSRESGKTNQNQGLTA 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00761 491 SUPERFAMILY SRF-like 2 74 IPR036879 GO:0003677|GO:0046983
Bach11g00761 491 Coils Coil 93 113 - -
Bach11g00761 491 SUPERFAMILY FAD-linked reductases, C-terminal domain 296 389 - -
Bach11g00761 491 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Bach11g00761 491 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Bach11g00761 491 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Bach11g00761 491 FunFam Rab GDP dissociation inhibitor 183 311 - -
Bach11g00761 491 CDD MADS_MEF2_like 3 69 IPR033896 GO:0000977|GO:0045944
Bach11g00761 491 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Bach11g00761 491 Gene3D - 179 325 IPR036188 -
Bach11g00761 491 ProSiteProfiles K-box domain profile. 86 184 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach11g00761 491 Coils Coil 123 143 - -
Bach11g00761 491 Pfam K-box region 87 168 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach11g00761 491 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Bach11g00761 491 PANTHER RAB GDP-DISSOCIATION INHIBITOR 185 210 IPR018203 GO:0005092|GO:0007264
Bach11g00761 491 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Bach11g00761 491 FunFam Transcription factor, MADS-box 13 83 - -
Bach11g00761 491 Pfam GDP dissociation inhibitor 213 389 IPR018203 GO:0005092|GO:0007264
Bach11g00761 491 Pfam GDP dissociation inhibitor 185 212 IPR018203 GO:0005092|GO:0007264
Bach11g00761 491 Gene3D - 14 81 IPR036879 GO:0003677|GO:0046983
Bach11g00761 491 SUPERFAMILY FAD/NAD(P)-binding domain 187 336 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00761 Bach-Chr11 6073658 6083882 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00761 1 168 MADS-box Gene Family AT2G22540 56.213 3.20e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach11g00761 GDI 7.8e-82 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00761 K17255 - gmx:100792036 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00761 11 6073658 6083882 Bach11g00761 11 6073658 6083882 ECH