Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00757 ATGAAGATGAAGAAGATGAAGAAGCAGAAGAAGAGGAGGGTTGCACTGTTAGAAGAAGATGACATGGACTTCTTCCTCAAAACAAGGTTCTCTTGTTATAAAGAGATTTGCAGCAGAGAGAAGGAGAGAGAAAAAATTCCAACATCGCCTGCTTCCAAAAGAACAGGAAAGAAATTTGCAGAAAAAGGAAACCTAAAATCAACAGAGTTTTATCCCAAAACATTGGATATCTCCATTGGGGAAATGACGAGACAGAAGATACAAATAAAGAAGATTGACAACATAGCTGCGAGACAGGTAACCTTCTCTAAGAGAAGGAGAGGGCTCTTCAAGAAGGCTCAGGAGCTTTCAACCCTTTGCGATGCTGAAATTGGTCTCTTAGTCTTTTCTGCTACTGGCAAGTTCTCTGAATATGCTAGCTCAAGTTTGCAGCAGGTTACTGAAAAGTATAATCTGCATTCAGACCCTAGAAGTTTAGGCCGCCAGTTCATTGGGCTGCAGACTGATAAGAATGACTACGACAACATGCTGCGGACGAAAGTAGCAGATATGACTCGGGAACTGAGGCTGCTGAATGGGGAAGGGCTGCAAGAAACGACGATAGAAGAATTGCAGAAATTAGAAGAATTACTTGAAACAGGCTTGACTCGTGTTTTAAAAGAAAAGGATGAAAGAATCGCAAAACAGATCAATGACCTCAAGAGGAAGGGACTCCAAATGATACAAGAGAATCTCCGATTGAAACAGAGTCTTGCATCTGCACATGAACACGGGCAGTCATCTGAGTCAACCATTATATGCTGCAGCTCATCTTATCCTCCCCCAGACTGTGACAGCTCTGACACCTCTCTCAACGTGGGGCTGTCTTTGTTTAAGTAG 879 0.4266 MKMKKMKKQKKRRVALLEEDDMDFFLKTRFSCYKEICSREKEREKIPTSPASKRTGKKFAEKGNLKSTEFYPKTLDISIGEMTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAQELSTLCDAEIGLLVFSATGKFSEYASSSLQQVTEKYNLHSDPRSLGRQFIGLQTDKNDYDNMLRTKVADMTRELRLLNGEGLQETTIEELQKLEELLETGLTRVLKEKDERIAKQINDLKRKGLQMIQENLRLKQSLASAHEHGQSSESTIICCSSSYPPPDCDSSDTSLNVGLSLFK 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00757 292 SUPERFAMILY SRF-like 82 155 IPR036879 GO:0003677|GO:0046983
Bach11g00757 292 ProSiteProfiles MADS-box domain profile. 82 142 IPR002100 GO:0003677|GO:0046983
Bach11g00757 292 CDD MADS_MEF2_like 84 155 IPR033896 GO:0000977|GO:0045944
Bach11g00757 292 SMART madsneu2 82 141 IPR002100 GO:0003677|GO:0046983
Bach11g00757 292 Gene3D - 94 160 IPR036879 GO:0003677|GO:0046983
Bach11g00757 292 PRINTS MADS domain signature 84 104 IPR002100 GO:0003677|GO:0046983
Bach11g00757 292 PRINTS MADS domain signature 104 119 IPR002100 GO:0003677|GO:0046983
Bach11g00757 292 PRINTS MADS domain signature 119 140 IPR002100 GO:0003677|GO:0046983
Bach11g00757 292 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 91 138 IPR002100 GO:0003677|GO:0046983
Bach11g00757 292 Pfam K-box region 176 251 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach11g00757 292 ProSitePatterns MADS-box domain signature. 84 138 IPR002100 GO:0003677|GO:0046983
Bach11g00757 292 ProSiteProfiles K-box domain profile. 167 257 IPR002487 GO:0003700|GO:0005634|GO:0006355
Bach11g00757 292 PANTHER SERUM RESPONSE FACTOR HOMOLOG 84 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00757 Bach-Chr11 5828321 5836711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00757 82 288 MADS-box Gene Family AT2G22540 45.339 1.13e-59 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Bach11g00757 K-box 2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00757 - - pcin:129285573 188.348