Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00736 ATGGGGCTTCCCAGAAGGTTGATGTCAGAAGAAGCTTGCAAAACACTTTGTCACTTAACAAAATGTTCCCCACCTTGCAATCATATCTGCTACAGTAACTGCTCAATCAATTCTTTTTCCCCATCTCCTCACATCAGAGATGTAATTGAACCAGCGGATAATCTCAGCAAAGCTCACCACAAAATTTCAACTGTTTTAATCATCACCCTCACTTTTCTCTTTGCTCCTTTCTTTATTTTCTTGTGCTATGCCCTCTATGCCAAGTTCCTCTCAGTTCGGTCAGGTTCAAGGAGGAGATCACAGCCACAAATAGAAGAAACCCGAGATGATTTTCTTGATGAAGAACATGGCCCTGTGGTGGACCACCCCATATGGTATATTCGCACCACTGGTCTTCAGGAATCAATTATCAGTGCCATCACAGTTTGCAAATACAAGAGAGGTGAGGGTTTGATTGAAGGAACAGAGTGCTCTGTTTGCTTGAGTGAATTTGAAGAGGATGAGACGCTTAGGCTTTTGCCTAAGTGTAGTCATGCTTTTCATCTCCCTTGCATTGATACTTGGCTTAGGTCACACGCCAATTGCCCTATGTGTCGTGCTCCTATAGTCACCAACACATCAAGAACAGCATCTGAGGACCCTAATCTTGTTGATTCTAGCTCTATGGAAAATACCCAGATGGAAATTGTGATAGATAATGGTGAAAACAGTGTGAGTATTGAAAATAGTGTTCCTGAATTGAGGGTTGGAGAAGAGAAAGAAGCTCAAATGGAGAGTGAAGAAGATGGGATAAGGGTATGTGAAAGTGGAAGCTCAAGTGCTGAGGGGGAGAACTTTCAGCCAAGGAGAAGATCATTTTCTCTGGATTCTTCTTCTGCTGCAAAGATCAATCTTGCTGTTGCTACTTTTGGTCCAGCTGAGGGATCTTCTGGGAATTCAAGTAGGAAATTGGGGCAAGTAAATGGAGCAATTGTGTCAAAGAGGGTTACAAAGGATAGTTCTTCTTTTAGAACAAAGTATCTGCAGAGTGCACCCACTTCAATGAAGAGGTCACGTTCCTTCAATGGGAAACACTTGTTATCCTGGTACAGCCGCAGTCAGAAGAAACCAAATGCTCCTATAAGGAGCTTTTAA 1134 0.4259 MGLPRRLMSEEACKTLCHLTKCSPPCNHICYSNCSINSFSPSPHIRDVIEPADNLSKAHHKISTVLIITLTFLFAPFFIFLCYALYAKFLSVRSGSRRRSQPQIEETRDDFLDEEHGPVVDHPIWYIRTTGLQESIISAITVCKYKRGEGLIEGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHANCPMCRAPIVTNTSRTASEDPNLVDSSSMENTQMEIVIDNGENSVSIENSVPELRVGEEKEAQMESEEDGIRVCESGSSSAEGENFQPRRRSFSLDSSSAAKINLAVATFGPAEGSSGNSSRKLGQVNGAIVSKRVTKDSSSFRTKYLQSAPTSMKRSRSFNGKHLLSWYSRSQKKPNAPIRSF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00736 377 MobiDBLite consensus disorder prediction 250 265 - -
Bach11g00736 377 SMART ring_2 157 198 IPR001841 -
Bach11g00736 377 ProSiteProfiles Zinc finger RING-type profile. 157 199 IPR001841 -
Bach11g00736 377 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 208 IPR013083 -
Bach11g00736 377 MobiDBLite consensus disorder prediction 250 284 - -
Bach11g00736 377 FunFam RING-H2 finger protein ATL54 132 205 - -
Bach11g00736 377 Pfam Ring finger domain 156 199 IPR001841 -
Bach11g00736 377 SUPERFAMILY RING/U-box 151 206 - -
Bach11g00736 377 PANTHER RING-H2 FINGER PROTEIN ATL16 51 317 IPR044600 GO:0016567|GO:0016740
Bach11g00736 377 CDD RING-H2_EL5-like 156 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00736 Bach-Chr11 5658976 5660109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00736 8 203 C3H Transcription Factor Family AT1G72220 45.161 4.19e-47 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00736 - - pcin:129285126 364.77