Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00730 ATGCCTTCTCCCTTTTCCTTAACACCCTCATCCTTTTCCTCTGATATGGGGCTTCCCAGAAGGTTGATGTCAGAAGAAGCTCGCAATCATATCTTCTACAGTAACTGCTCAACCAATTCTTTTCCCCCATCTCCTCCTCACATATATGTAATTGAACCAGCGGATAATCTCAGCAAAGCTCACCACAAAATTTCAACTGTTTTAATCATCACCCTCACTTTTCTCTTTGCTCCTTTTTTTATTTTCTTGTGCTATGCCCTCTATGCCAAGTTCCTCTCAGGTCGTTCAGGTTCAAGGAGGAGATCACAGCCACAAATAGAAGAAACCCGAGATGATTTTCTGGATGAAGAACATGGCCCTGCGGTGGACCACCCCATATGGTATATTCGCACCACTGGTCTTCAGGAATCAATTATCAGTGCCATCACAGTTTGCAAATACAAGAGAGGTGAGGGTTTGATTGAAGGAACGGAGTGCTCTGTTTGCTTGAGTGAATTTGAAGAGGATGAGACGCTTAGGCTTTTGCCTAAGTGTAGTCATGCTTTTCATCTCCCTTGCATTGATACTTGGCTTAGGTCACACGCCAATTGCCCTATGTGTCGTGCTCCTATAGTCACCAACACATCAAGAACACCATCTGAGGACCCTAATCTTGTTGATTCAAGCTCTATGGAAAATACCCAGATGGAAATTGTGATAGATAATGGTGAAAACAGAGTGAATATTGAAAATAGTGTTCCTGAATTGAGGGTTGGAGAAGAGGAAGAAGCTCAAATGGAGAGTGAAGAAGATGGGAGAAGGGTATGTGAAAGTGGAAGCTCAAGTGCTGAGGGGGAGAACTTTCAGCCAAGGAGAAGATCAGTTTCTCTGGATTCTTCTTCTGCTGCAAAGATCAATCTTGCTGTTGCTACTTTTGGTCCAGCTGAGGGATCTTCTGGGAATTCAAGTAGGAAATTGGGGCAAGTAAATGGAGCAATTGTGTCAAAGAGGGTTACAAAGGGTAGTTCCTCTTTTAGAGCAAAGTATCTGCAGAGTGCACCTACTTCAATGAAGAGGTCACGTTCCTTCAATGGGAAACACTTGCTATCCTGGTACAGCCGCAGTCAGAAGAAACCAAATGCTCCTATAAGGAGCTTTTAA 1140 0.4351 MPSPFSLTPSSFSSDMGLPRRLMSEEARNHIFYSNCSTNSFPPSPPHIYVIEPADNLSKAHHKISTVLIITLTFLFAPFFIFLCYALYAKFLSGRSGSRRRSQPQIEETRDDFLDEEHGPAVDHPIWYIRTTGLQESIISAITVCKYKRGEGLIEGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHANCPMCRAPIVTNTSRTPSEDPNLVDSSSMENTQMEIVIDNGENRVNIENSVPELRVGEEEEAQMESEEDGRRVCESGSSSAEGENFQPRRRSVSLDSSSAAKINLAVATFGPAEGSSGNSSRKLGQVNGAIVSKRVTKGSSSFRAKYLQSAPTSMKRSRSFNGKHLLSWYSRSQKKPNAPIRSF 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00730 379 ProSiteProfiles Zinc finger RING-type profile. 159 201 IPR001841 -
Bach11g00730 379 MobiDBLite consensus disorder prediction 97 118 - -
Bach11g00730 379 PANTHER RING-H2 FINGER PROTEIN ATL16 51 318 IPR044600 GO:0016567|GO:0016740
Bach11g00730 379 MobiDBLite consensus disorder prediction 273 288 - -
Bach11g00730 379 SMART ring_2 159 200 IPR001841 -
Bach11g00730 379 SUPERFAMILY RING/U-box 153 211 - -
Bach11g00730 379 MobiDBLite consensus disorder prediction 101 118 - -
Bach11g00730 379 MobiDBLite consensus disorder prediction 244 288 - -
Bach11g00730 379 FunFam RING-H2 finger protein ATL54 134 207 - -
Bach11g00730 379 Pfam Ring finger domain 158 201 IPR001841 -
Bach11g00730 379 CDD RING-H2_EL5-like 158 201 - -
Bach11g00730 379 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 134 210 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00730 Bach-Chr11 5551936 5553075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00730 50 212 C3H Transcription Factor Family AT1G72220 51.190 1.52e-47 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00730 - - pcin:129285126 349.747