Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00716 CTCTACTTCTCAGTTGTCGCCGTTATTCATTTGTCGCGGAGCCATGGAAAATGACGACGTTGATATGTTGGAAGAAGAGACCAATGAAGCTGAATTGGATGACATGAAGAAGCGGTTGAAAGAAATGGAGGATGAAGCTGCTGCTTTGCGAGAGATGCAGGCGAAGGTCGAGAAGGAAATGGGATCTGTACATGATCCTGCTACTGCTGCTGCAAGCCAGGTCAATAAAGAGGAAGTTGACTCACGATCAATCTTCATAGGCAATGTAGATTATTTGTGCACTCCTGAAGAAGTGCAGCAGCATTTCCAATCATGTGGGACAGTAAACAGAGTTACCATTCGGACTGACAAGTTTGGCCAACCCAAGGGTTATGCTTACGTGGAGTTCCTCGAAGTAGAGGCTGTTCAAGAGGCTCTCCTGCTGAATGAATCTGAATTACATGGGCGCCAATTGAAGGTAACCGCAAAGCGGACCAATATACCTGGAATGAAGCAATATCGACCCCGCCGTTCCAATCCTTACATGGGATTCCGAGGCAGAACCCCATTTGCACCTCCTTTTGTCTATTCTCCGTATGGATATGGAAAGGTTCCAAGGTTCAGAGCGCCAATGCGTTACGGCCCTTATTATTGAATGTCAATGCTACTGAAATGGATCTTTCTATGGAGATGCATGGACAACGACACCCTTCTCCCTCGCCTGTGTCTTGGGTGACGTCTTGGGTACAAGTTACGGGGGATTCTCTGACCACCTAAAGTGATGTGGTTGGTTCTGTGAGGATTAAGCATTGACTTAAAAAGTAAAACCTTGTAAAATTGTGGTGTTGCAACTGCTCTGTTTTACTATGTGGATAAATTCAAATGAGGTTCTTTCTATAATATCTTTCGTAAATGTGGTTAAATGTGG 907 0.4487 MENDDVDMLEEETNEAELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVHDPATAAASQVNKEEVDSRSIFIGNVDYLCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPYMGFRGRTPFAPPFVYSPYGYGKVPRFRAPMRYGPYY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00716 196 Gene3D - 1 150 IPR012677 -
Bach11g00716 196 MobiDBLite consensus disorder prediction 1 15 - -
Bach11g00716 196 MobiDBLite consensus disorder prediction 1 20 - -
Bach11g00716 196 SUPERFAMILY RNA-binding domain, RBD 58 166 IPR035979 GO:0003676
Bach11g00716 196 CDD RRM_II_PABPs 69 140 - -
Bach11g00716 196 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 10 166 - -
Bach11g00716 196 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 70 138 IPR000504 GO:0003723
Bach11g00716 196 Coils Coil 11 45 - -
Bach11g00716 196 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 68 144 IPR000504 GO:0003723
Bach11g00716 196 SMART rrm1_1 69 140 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00716 Bach-Chr11 5471343 5475551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00716 69 139 Eukaryotic Initiation Factors Gene Family AT2G36660 31.944 2.00e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00716 K14396 - gmx:100791351 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00716 11 5471343 5475551 Bach7g00880 7 19971276 19974019 BWGD