Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00700 CTTTCCCCGCTCCCCGCTCTTTGTGTGCTAGCTGCAACGATGTCTCACTTTGGAAGGTCAGGTCCCCCAGATATCGCAGACACATACTCTCTTCTTGTGCTTAACATCACATTCCGCACTTCCGCTGATGACCTATTTCCGCTATTCGATAAGTACGGCAAGGTCGTCGACATCTTCATCCCCAGGGATCGAAGGACTGGTGAGTCAAGGGGTTTTGCGTTTGTTCGCTACAAGTATGCAGATGAGGCATCAAAAGCCGTGGAAAAGCTGGATGGAAGAGTTGTTGATGGTAGAGAAATAACTGTCCAGTTTGCGAAATATGGGCCAAATGCTGAAAGGATCCACAGGGGAAGGATTAGTGAACCATCCCCGAGATCTAGGCACAGGTCAAAAAGCCGAAGTCCCAAGCGAAGGTATCGTGATGATTACAGGGACAGGGACTACAGGAGGAGAAGTCGCAGTAGAAGTTATGATAGGTATGAACGGGACAGGTACCGTGGGAGAGAGAGAGGTTATCGTCGGCGAAGCAGAAGCCGTAGTACCAGTCCTGATTACTACAAGAGCCGTGGGAGGGGCCGCTATGATGATGATGAGATACGCAGTCGAAGCAGAAGTCGATCAGTGGATAGCCGCTCTCCTGCACGGCGTAGCCCCAGTCCTCGAAGGAGTCCTTCTCCACGCAGAAGCCCTTCCCCCAGAAGAAGCCTTTCCCCACGGAAGAGTCCTAGGGGTGAAAGCCCCGAGAGTCAGAGCCGTGATGGACGGTCGCCTACACCCCGCAGTGTCTCACCACGTAGTCGACCACGTGATTCACGAAGCCCATCCCCTCGGAATTCGGATGATGATGAATGAGCTCAGTGTTATGGATATGCTTTTGGAGGCTACCAAAGTATTTTACCTGAGCTGCTTTGCTAATGTTGGATCTTTTGATTATTGTGCAATCAAATCCAAGTCAATGATAGATTTTATGATCCAAAGTGCTGGTTTGGTAGGAT 995 0.5055 MSHFGRSGPPDIADTYSLLVLNITFRTSADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEASKAVEKLDGRVVDGREITVQFAKYGPNAERIHRGRISEPSPRSRHRSKSRSPKRRYRDDYRDRDYRRRSRSRSYDRYERDRYRGRERGYRRRSRSRSTSPDYYKSRGRGRYDDDEIRSRSRSRSVDSRSPARRSPSPRRSPSPRRSPSPRRSLSPRKSPRGESPESQSRDGRSPTPRSVSPRSRPRDSRSPSPRNSDDDE 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00700 270 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Bach11g00700 270 MobiDBLite consensus disorder prediction 98 270 - -
Bach11g00700 270 MobiDBLite consensus disorder prediction 98 115 - -
Bach11g00700 270 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 14 246 - -
Bach11g00700 270 Gene3D - 5 103 IPR012677 -
Bach11g00700 270 SUPERFAMILY RNA-binding domain, RBD 9 119 IPR035979 GO:0003676
Bach11g00700 270 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 19 88 IPR000504 GO:0003723
Bach11g00700 270 MobiDBLite consensus disorder prediction 163 198 - -
Bach11g00700 270 MobiDBLite consensus disorder prediction 252 270 - -
Bach11g00700 270 FunFam Serine/arginine-rich splicing factor SC35 4 103 - -
Bach11g00700 270 MobiDBLite consensus disorder prediction 123 155 - -
Bach11g00700 270 SMART rrm2_1 17 90 IPR003954 GO:0003676
Bach11g00700 270 CDD RRM_SRSF2_SRSF8 18 90 - -
Bach11g00700 270 SMART rrm1_1 17 90 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00700 Bach-Chr11 5319178 5322111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00700 14 92 Eukaryotic Initiation Factors Gene Family AT3G11400 35.443 4.60e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00700 K12891 - qsa:O6P43_031609 247.669