Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00683 ATGGAGAAGGAGCGGGAGCGGGTGATTTCATTTTTCACGAGCTCTTTTCTTCTTTCGGCAATATTAGTGTTTGATTCGGTGCTCAAGGTTTCTGGCAATGCTGAAGGTGATGCCCTGAATGCACTGAAGAACAGCTTGCTTGATCCTAACAATGTTCTTCAGAGCTGGGACGCTACTCTTGTCAATCCATGCACATGGTTTCATGTTACGTGCAATAATGAAAATAGTGTGACGCGAGTTGATCTTGGAAATGCAAACCTTTCCGGTCAACTGGTTTCAAATCTTGGCCAGCTCTTGAATTTGGAGTACTTGGAACTTTATAGTAATAATATGACTGGAAAGATACCAGAGGAGCTTGGAAATTTGAAAAAGTTGGTGAGCTTGGATCTTTATTCGAACAACTTAACTGGACACATCCCAGAGACATTGGGCAACCTTAAAAAATTACGTTTCCTGCGTCTTAACAATAACACCTTGTCAGAAACCATTCCCATGACTTTGACAGCCGTTGATTCACTGCAAGTCCTTGATCTTTCAAACAACAAATTAACAGGATTAGTCCCGGTTAATGGTTCTTTTCAATCATTTACTGCCCTAAGTTTTCAAGGTAATCCTGGGTTGATTCAACAAAATGTTACACCATCACCGCCAATTAATCCAACACCACAAGCTTCATCAGGAAACAGTGCTACTGGAGCTATTGCTGGAGGAGTTGCAGCCGGTGCCGCACTTCTATTTGCAGCCCCTGCAATTGCACTTGCTTATTGGCGAAGGAGGAGATCACAAGATCATTTCTTTGATGTTCCTGCTGAGGAAGACCCTGAAGTGCACCTTGGTCAGCTTAAAAGGTTTTCACTGCGTGAGCTTATAGTTGCAACAGATAACTTTAGCAGCAAAAACATTCTGGGTAGAGGTGGATTTGGAAAAGTTTATAAAGGACGCTTAGCTGATGGTTCTCTAGTAGCAGTGAAAAGACTTAAAGAGGAACACAGCCAGGGTGGTGAACTACAGTTTCAAACAGAAGTGGAAATGATCAGCATGGCCGTGCACCGTAATTTGCTTAAGCTGCGTGGTTTTTGCATGACACCCACTGAACGGTTGCTTGTGTATCCTTTAATGCCTAATGGAAGTGTAGCATCATGTTTACGAGATCGTCCTGAGTCTCAACCTCCACTTGACTGGTCAAAAAGGAAGCATATTGCACTGGGATCTGCTAGGGGGCTTGCTTATTTGCATGATCACTGTGACCCCAAAATTATTCATCGTGATGTCAAAGCTGCAAATATATTGTTGGATGAGGACTATGAAGCAGTTGTTGGAGACTTTGGTTTAGCAAAACTCATGAATTATAAAGATACTCATGTTACCACTGCTGTACGTGGCACGATTGGGCATATAGCACCAGAGTACCTATCAACTGGAAAGTCTTCTGAGAAGACTGATGTTTTTGGATATGGCGTCATGCTTCTTGAAATCATAACTGGACAGAGAGCTTTTGATCTAGCTCGACTTGCCGACGATGACGATGTCATGTTGCTTGATTGGGTGAAAGGACTTCTGAAAGACAAGAAGTCGGGAATACTAGTTGATGCTGATTTACAGGGTAATTATAATGAGGAGGAGGTAGAGCAGCTAACACAAGTGGCCTTATTATGCACACAAGGGTCTCCTATGGAGAGACCCAAGATGTCTGAGGTGGTCAGAATGCTTGAAGGTGATGGCTTGGCTGAAAAATGGGAGCAGTGGCAGAGAGACGAGATGGTCCGCCAAGATCATACCCGCAACACTTACCCCACTTCTCCTTGGACAGTAGTAGACTCAACGTCAGGTATCCCACCAGATGTACTATCAGGTCCCAGATGAGATGATCCCTCAGGATTCTACAGCCATGTCATGCTTATACACAATCCTCGGTGAAGTACTTCAGATTTGTGCATATGATTACTTTTCCTTTCTTTCTTTTTGTTTTTCCATCTTTTTTGGTCCAGATTACACACCCCAATGATCATGTTGTAACTTGTGTAATTATAAAGAGAAAGAAGAAAGTTGTAATTTTTAGTGGGTTGTCAAGTGGTGCTGGTAGAACTTAAAGCACAAGTGCCCATACTTTTTGTCATTATGTATATTTAGAAATTACCTTATGGAAATAAATGCAATTCTATACTCGTT 2169 0.4228 MEKERERVISFFTSSFLLSAILVFDSVLKVSGNAEGDALNALKNSLLDPNNVLQSWDATLVNPCTWFHVTCNNENSVTRVDLGNANLSGQLVSNLGQLLNLEYLELYSNNMTGKIPEELGNLKKLVSLDLYSNNLTGHIPETLGNLKKLRFLRLNNNTLSETIPMTLTAVDSLQVLDLSNNKLTGLVPVNGSFQSFTALSFQGNPGLIQQNVTPSPPINPTPQASSGNSATGAIAGGVAAGAALLFAAPAIALAYWRRRRSQDHFFDVPAEEDPEVHLGQLKRFSLRELIVATDNFSSKNILGRGGFGKVYKGRLADGSLVAVKRLKEEHSQGGELQFQTEVEMISMAVHRNLLKLRGFCMTPTERLLVYPLMPNGSVASCLRDRPESQPPLDWSKRKHIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEDYEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLEIITGQRAFDLARLADDDDVMLLDWVKGLLKDKKSGILVDADLQGNYNEEEVEQLTQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWEQWQRDEMVRQDHTRNTYPTSPWTVVDSTSGIPPDVLSGPR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00683 620 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Bach11g00683 620 FunFam Somatic embryogenesis receptor-like kinase 1 373 590 - -
Bach11g00683 620 Pfam Leucine Rich Repeat 172 188 IPR001611 GO:0005515
Bach11g00683 620 SMART LRR_typ_2 170 195 IPR003591 -
Bach11g00683 620 SMART LRR_typ_2 122 146 IPR003591 -
Bach11g00683 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 17 581 - -
Bach11g00683 620 FunFam Somatic embryogenesis receptor kinase 1 265 372 - -
Bach11g00683 620 MobiDBLite consensus disorder prediction 593 607 - -
Bach11g00683 620 ProSiteProfiles Protein kinase domain profile. 296 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00683 620 MobiDBLite consensus disorder prediction 590 620 - -
Bach11g00683 620 SUPERFAMILY L domain-like 35 201 - -
Bach11g00683 620 Gene3D Transferase(Phosphotransferase) domain 1 373 590 - -
Bach11g00683 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Bach11g00683 620 FunFam Somatic embryogenesis receptor kinase 1 31 218 - -
Bach11g00683 620 Pfam Protein kinase domain 297 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00683 620 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Bach11g00683 620 Gene3D Ribonuclease Inhibitor 32 216 IPR032675 -
Bach11g00683 620 ProSiteProfiles Leucine-rich repeat profile. 172 193 IPR001611 GO:0005515
Bach11g00683 620 SUPERFAMILY Protein kinase-like (PK-like) 275 571 IPR011009 -
Bach11g00683 620 Gene3D Phosphorylase Kinase; domain 1 265 371 - -
Bach11g00683 620 SMART serkin_6 296 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00683 Bach-Chr11 5206571 5213225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00683 4 620 Receptor kinase-like Gene Family AT4G33430 73.543 0.0 924
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bach11g00683 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00683 K13416 - qsa:O6P43_012307 941.799