Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00660 ATGGAGAGGAGCTGTTACAATATTCTGATAATGAAAGAATCGAAGCCAGTGATGGTAATGGCTTTGGTTCAGATGGCGTATGCTGGGATGACGATTTTGTATAAATTAGCCGATGAAGATGGGATGAGTTTGGAGGTTCTCATTTCCTACCGTATGATGTTTGCTTCAGCATTCATGGTTCCTTTTGCCCTCTTTGTTGAAAGGAAGAGCAGGCCGCCGTTGACATGGTTCATACTCTTGCAAGCTTTCGTTTGTGGGCTATTGGGGGGCACTCTGGCTCAAAATTTATTCATTGAGGGTTTAGCCTTAACATCAGCAACATTTGCAGCTGCCATGACTAATCTGATGCCAGGCATTGCCTTCATCATGGCCATTCTCTTCCGGTTGGAGAAACTGGCCCTGGGCACCCTTGTGGGGAAGGCCAAGGTGGTAGGGACAGCCATAGGGATAGGTGGAGCCATGGTTTTCACGTTCTACAGAGGTGCGGTGATACAAATCTGGTCAACCCATGTTGACCTTTTGCATCACCGTAAAGATGAACACGTGGCATCATCACCCAGAGGTTTGAACCATATGGTATTGGGTGCCTTTCTCTTTGATGTCCGTAATGGCATCAGTACAGAGTGTTGCTTTCGCGCTTTGCCTAGAGAGAGATTGGAATCAGTGGAAATTGAGTTGGAACATCAGGCTCCTGACCGTGACTTATTCGAAAGGTATTTTCTTTTGGATTCTGCCAAGGATTTCATCTCTGCAAGTGCCTCTTATGCTTTAGATGCTGATTTCTACCATCTCGAAAAAGGGTTGCTTTTGATTCAGATTTGGAGATTTGATCGGCTCCGATACCTTGAAGTTCAAAGAGCCATATGCGCGCAGCATCAGATATATTTCATCAGAAGGATCACATTACATTCTTCTGATCCACACCGTAAAATGTCATTTCGAAGCATAGTTCGTGATGTGAGGGATAGTTTTGGAAGCTTATCTAGACGGAATTTTGATATTAGGTTGACAGGCCATCACAGAGGAAAGTCTCATGGTTCGGTAAATGATCTGCATGACCAACCTTTAGTAATTCAAAATAGTCGCTGGGCTAGTCTACCCTTAGAACTGCTATATGATGTCATTAGAAGGCTGGAGGAAAGTGAGAGTACGTGGCCTGCTCGAAAACATGTTGTTGCATGTGCGGCAGTTTGCCGCTCTTGGAGAAATATGTGCAAGGAAATTGTGAGGAGCCCAGAGTTCTGTGGCAAGCTTACTTTTCCTGTCTCCCTGAAGCAGCCAGGACCACGTGATGGAACCGTTCAATGTTTCATCAAAAGGGATAAATCTAATTTAACATACCATCTATATCTTTGTCTCAGCCCTGCTTTGTTGGTTGAAAATGGAAAATTCCTCCTTTCTGCCAAGAGAACGCGAAGAAGTTGTTACACGGAGTACATTATCTCTATGGATGCTGACAACATCTCTAGATCAAGTAGCACATACATTGGGAAGCTGAGGTCAAACTTCCTTGGTACAAAATTCATAATATATGATACACAGCCTCCATGCACTTCTGCTCATATTTCCTCTCCTGGGAAGACTAGCAAAAGGTTTTATTCCAAAAAAGTGTCACCGAAGGTCCCATCTGGGAGTTACAACATAGCTCAAGTAACATATGAATTAAATGTGCTTGGTACTCGAGGTCCAAGGAGGATGCACTGCATCATGCATTCCATACCAGCCTCAGCCCTAGATGCAGGTGGCAGTGTTCCAGGCCAACCAGAGCTTCTTCCTCGCTCCCTTGAGGACTCATTCCGGAGCATCTCCTTTTCGAAGTCTCTGGATCACTCTATTGAGTTCAGCAGTGCCCGGTTTTCTGAAATTGGGGGATCGGGCAAGGAAGATGAGGATGGCAAGGCAAGACCGATGGTCCTGAAAAATAAGCCTCCAAGATGGCACGAACAGTTACAATGCTGGTGCCTGAATTTCCGTGGACGGGTGACAGTTGCATCTGTTAAAAACTTCCAGCTGATTGCCGCCACCCAGCCAGCTGCTGGTGCACCTACGCCATCTGCTGGAGCACCAACACCATCTCAGCCTCTGCCGCCGGACCATGATAAGATAATTCTGCAGTTTGGCAAAGTTGGGAAAGATTTGTTCACCATGGACTATCGATATCCTATATCTGCATTTCAGGCTTTTGCAATATGCCTAAGTAGCTTTGACACCAAACTGGCTTGTGAATAG 2229 0.4549 MERSCYNILIMKESKPVMVMALVQMAYAGMTILYKLADEDGMSLEVLISYRMMFASAFMVPFALFVERKSRPPLTWFILLQAFVCGLLGGTLAQNLFIEGLALTSATFAAAMTNLMPGIAFIMAILFRLEKLALGTLVGKAKVVGTAIGIGGAMVFTFYRGAVIQIWSTHVDLLHHRKDEHVASSPRGLNHMVLGAFLFDVRNGISTECCFRALPRERLESVEIELEHQAPDRDLFERYFLLDSAKDFISASASYALDADFYHLEKGLLLIQIWRFDRLRYLEVQRAICAQHQIYFIRRITLHSSDPHRKMSFRSIVRDVRDSFGSLSRRNFDIRLTGHHRGKSHGSVNDLHDQPLVIQNSRWASLPLELLYDVIRRLEESESTWPARKHVVACAAVCRSWRNMCKEIVRSPEFCGKLTFPVSLKQPGPRDGTVQCFIKRDKSNLTYHLYLCLSPALLVENGKFLLSAKRTRRSCYTEYIISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPCTSAHISSPGKTSKRFYSKKVSPKVPSGSYNIAQVTYELNVLGTRGPRRMHCIMHSIPASALDAGGSVPGQPELLPRSLEDSFRSISFSKSLDHSIEFSSARFSEIGGSGKEDEDGKARPMVLKNKPPRWHEQLQCWCLNFRGRVTVASVKNFQLIAATQPAAGAPTPSAGAPTPSQPLPPDHDKIILQFGKVGKDLFTMDYRYPISAFQAFAICLSSFDTKLACE 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00660 742 ProSitePatterns Tub family signature 2. 727 742 IPR018066 -
Bach11g00660 742 FunFam Tubby-like F-box protein 420 742 - -
Bach11g00660 742 Pfam F-box domain 363 410 IPR001810 GO:0005515
Bach11g00660 742 SUPERFAMILY F-box domain 359 407 IPR036047 GO:0005515
Bach11g00660 742 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 157 - -
Bach11g00660 742 ProSitePatterns Tub family signature 1. 657 670 IPR018066 -
Bach11g00660 742 PRINTS Tubby superfamily signature 479 495 IPR000007 -
Bach11g00660 742 PRINTS Tubby superfamily signature 657 673 IPR000007 -
Bach11g00660 742 PRINTS Tubby superfamily signature 720 742 IPR000007 -
Bach11g00660 742 PRINTS Tubby superfamily signature 545 572 IPR000007 -
Bach11g00660 742 PRINTS Tubby superfamily signature 495 519 IPR000007 -
Bach11g00660 742 PRINTS Tubby superfamily signature 699 718 IPR000007 -
Bach11g00660 742 PRINTS Tubby superfamily signature 639 656 IPR000007 -
Bach11g00660 742 FunFam Tubby-like F-box protein 358 411 - -
Bach11g00660 742 Gene3D Tubby Protein; Chain A 422 736 IPR025659 -
Bach11g00660 742 PANTHER TUBBY-RELATED 346 740 - -
Bach11g00660 742 Pfam Tub family 424 737 IPR000007 -
Bach11g00660 742 CDD F-box_AtTLP-like 363 407 - -
Bach11g00660 742 Pfam EamA-like transporter family 16 141 IPR000620 GO:0016020
Bach11g00660 742 SUPERFAMILY Tubby C-terminal domain-like 412 742 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00660 Bach-Chr11 5023276 5032126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00660 311 742 TUB Transcription Factor Family AT1G76900 70.065 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Bach11g00660 Tub 1.6e-115 CL0395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00660 K19600 - gmx:100814578 777.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00660 11 5023276 5032126 Bach11g00660 11 5023276 5032126 ECH