Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00649 ATGGGGAGAGAAGAAAAAGAGACTAAGGTGGCAATTGATCCCTCTTTGAAGATTGATTCTAAACAGAAACAAAAGGAAGAAGAAACAGCAAAAGTAGATGATCATAAGCAAGTAGAAGTGGATGACAAGGAAGAAAAGACACCAGCAGATGATAAGGAAGAAGCTACTGAAACCACAACAGGTGAAATTGAAGACGATGCTTCAGTTGAATTATCTTCACCAATAGACAAAAATAAGAAAGAGCAGTTAAGTGTCTTACAAATGGAGATGAATCTCATGAAAGAGGAAAACAAAGTTCTAAGGAATGAGGTGGAGAAAACAATGAAAGACTACAATGATCTTCAAATGAAATTTTCAGTGATCCAGCAGAACATCAAGAAAAAGGATCCTCAAATTTCTCTCTCACTCCAAGACAATGCAAAAATCAGCAGGGAAGGACCAAGGAAAGTTCAAGAGATCTTTGGTGTCAAAATTCAAATATCTCCATCTCCACCAAAAACTGATGATAGCATTAGTAACAGTGAATTGGATTTATCACTAAGGTTGCAACCAAACACAAGTCAACAAGAAATTAGAGTACTGAAAGATAAAGAAGAGAATAAGAAAGAATTGTCAAGTTTTGCATCATTGCCAAACAAGCTACTGAGAACTCATCATGAGTTGCCTGGTGTTACTACGCATGTTGCCTCTCCTCCCAATAGAAAGGCTAGGGTTTCGGTTAGAGCAAGATGTGAAGCAGCCACAATGAATGATGGGTGCCAATGGAGAAAATATGGGCAAAAAATTGCAAAAGGAAATCCATGCCCAAGAGCTTATTATCGTTGCACTGTGGCCCCAGGTTGCCCAGTTAGAAAACAGGTGCAAAGATGCCTAGAGGACATGTCCATTCTCATTATGACGTATGAGGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCTATGGCTTCTACTGCTTCTGCTGCAGCTTCCTTTACTTTACTAGACTCGAGCAATCCTATTTCAGATTATTATTACACCCAAGCCAATCTTCCTTTCAACAGCTTCCATCCAATAAACCCTGGTTCCAATATCAGAAGCATAAACCCTAATGACCCTTCCAAAGGGATTGTCTTTGACCTTACGAATAATCTCAATGAACCACCAAGATTTCCTATGGCAGAAGCTGGTAGCTCCTCCAGTTCAGCAGCTAAACAGGGTTTATTTTCTTGGATGCCAAACAAGTCATCATCAGAGTGGAAATTACAATATCGGCTTGAATAA 1266 0.3957 MGREEKETKVAIDPSLKIDSKQKQKEEETAKVDDHKQVEVDDKEEKTPADDKEEATETTTGEIEDDASVELSSPIDKNKKEQLSVLQMEMNLMKEENKVLRNEVEKTMKDYNDLQMKFSVIQQNIKKKDPQISLSLQDNAKISREGPRKVQEIFGVKIQISPSPPKTDDSISNSELDLSLRLQPNTSQQEIRVLKDKEENKKELSSFASLPNKLLRTHHELPGVTTHVASPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILIMTYEGTHNHPLPVGATAMASTASAAASFTLLDSSNPISDYYYTQANLPFNSFHPINPGSNIRSINPNDPSKGIVFDLTNNLNEPPRFPMAEAGSSSSSAAKQGLFSWMPNKSSSEWKLQYRLE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00649 421 SUPERFAMILY WRKY DNA-binding domain 242 310 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach11g00649 421 SMART WRKY_cls 249 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach11g00649 421 Gene3D WRKY domain 234 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bach11g00649 421 Pfam WRKY DNA -binding domain 250 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach11g00649 421 ProSiteProfiles WRKY domain profile. 244 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bach11g00649 421 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 51 396 IPR044810 GO:0003700
Bach11g00649 421 Coils Coil 83 117 - -
Bach11g00649 421 MobiDBLite consensus disorder prediction 1 76 - -
Bach11g00649 421 FunFam probable WRKY transcription factor 31 234 311 - -
Bach11g00649 421 Coils Coil 18 38 - -
Bach11g00649 421 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00649 Bach-Chr11 4952992 4954876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00649 35 370 WRKY Transcription Factor Family AT1G68150 46.176 1.15e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bach11g00649 WRKY 2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00649 - - gmx:100820209 484.182