Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00620 AGAGAAAGCGCAATGGAGGCTCCTCCCGATGACGATTGCTGCCCTGTCTGCCATGGCGAATTCAAGCTTCCATGCCGCACCTCCTGCTCCCACTGGTTTTGTGGAGAGTGTATATTAAGCGTGTGGCTCCACAGAGATGCAATGAAGCGATGCAAATGCCCGATTTGTTGCTTCTATTTTTCAACCCTGGCACCATTCCAAGCCGCATTTGACTACAACCAGGGACCTGAAGCTCAGAAAATTATGGAAAATGTGAGAAGGTACAATAGGTTGCATATGGGGGGAGTGCAAGGACTCATTCAGAAACTATATGATCTCCCTTTTCTTGTTCGAGTGGCTCTACAAGATATGATGGATCCTGATAAAACAAGCACCTACTTGTATAAAGTGCGCATTTTTGCAATGCTACTTGGCATGATTTACATGCTGATCCCATTGGACATCATCCGATATGATAAACGAAAGATATTAAGTTTGTTTGACCACTCTGCGGTTGCGTTTGTAACTATCATGCATATAATTGGACTCTTTCGTTCAAGACGGTTGTTTTGGCGATAA 558 0.4427 MEAPPDDDCCPVCHGEFKLPCRTSCSHWFCGECILSVWLHRDAMKRCKCPICCFYFSTLAPFQAAFDYNQGPEAQKIMENVRRYNRLHMGGVQGLIQKLYDLPFLVRVALQDMMDPDKTSTYLYKVRIFAMLLGMIYMLIPLDIIRYDKRKILSLFDHSAVAFVTIMHIIGLFRSRRLFWR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00620 181 SUPERFAMILY RING/U-box 5 61 - -
Bach11g00620 181 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Bach11g00620 181 SMART ring_2 10 52 IPR001841 -
Bach11g00620 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 89 IPR013083 -
Bach11g00620 181 Pfam RING-type zinc-finger 10 50 IPR027370 -
Bach11g00620 181 ProSiteProfiles Zinc finger RING-type profile. 10 52 IPR001841 -
Bach11g00620 181 PANTHER UNCHARACTERIZED 2 177 IPR038896 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00620 Bach-Chr11 4713981 4716724 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00620 2 131 C3H Transcription Factor Family AT4G33940 44.615 9.79e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00620 K15707 K24166 cave:132168217 253.447