Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00619 ATGAGGCAAGGACAATCCAAATCTGCCGTGGGTGTTAAATGTGATGATAAGCTTCCTAAAGTTAATTGGTTGGAGCACGCCCGTGCACATGATAACTTCTCATGCCAAAACAAGTTTTTGAATTCAAATTTTCTGTTCTCCTTGCCAACACAAAAACCTTGTTCCCAAGAAGCAACGGATGGGGGGTTTGTGGCTGGTCAAAGTCACAGCATTGAAAGGTCGCAAAGAGGACAAGTTGAAAAGGCTTGGCATGCTCTCTCGAGTCTACAGATTTCTTGCAGGAGTTATACTAAACCTGGAAAAACTGTACAAATTACTCCTCCTCTACATGAAGAGGGGAGAATAAATTCCTTCCAGAAAGCCTCTGAGAATGACAGATGTTCTCCAAATTTGCAAAATCATAAATTTGTCCGTGAAAACAACGCCAAGTCTAATCAATATTTTGCATCAAGCAATGCTAGTGCTGAAGATGAAGGAAATAGTGTGAGGTATTCTGATGACACGAGAACTCCAACAGTAAATAGTCATTGTTCTCGGGTTTTGGATGGTTCAGTGAACGTACATACCAAGTATACTGGTCAAAACAAAGATTCTACAAAATGTATGGCTGATGACATTGATGGTGATGATGATGATTTTCTTAAGAACATTGATGTTGATCAAATAGTGGAAAACTACCAGTCAAGTTGTACTCCTCAACCGCCAGTATCCAAATTTCCTCCTATTACTCCAGCTATAGATAAGAATAATTTTGCTGGACAAGAGGAGAATTGTTTGCCACCAGAATTGTGCTCGGATTGCATCCACGGTTATAAGGTAGGGCTTTGCCCTGAAGCAGCAAATCATTTGCAGGAATTTAAGGATAATCTAATTGCTATCTCCAACGAACTTCTTGACAATGCTGACAATCTCAATCCAACAGAGATTGCAAGGCTTCGCCAAGATAGGTCACAGCTCAATAAGCAAATTCAGCAACTTGAAAGATATCTCCATTCTAGTAATCTTGATGCGGAAAGGCAAAAGTCACATTTTTCTGCGTCAACAGCACCTCCTGCATCTTTCCTGTTCGAAACGCCTCATCAAAGTGTCTCCAGGAGTGAAACAGTGAGATATGATACCCAGGTTTATACGGGTAATGAGTCATATGGGTCGTTCTCTGCAGTCGATAAGTATGGGATGTCAGCAGGTCCGGTGGAGAGGGAAGCATACATCCCAAAGATTATTGACGTTAATTATATAGAAGGTTCTGGAGATGAGCGCTGGAGGAGCCAGAATTTCCCTTGGACAAAAAAGTTGGAGGCCAATAATAAGAAAGTTTTTGGAAATCACTCATTCCGCCCCAATCAAAGAGAGGTTATTAATGCAACCATGAGTGGCTGTGATGTTTTTGTTCTAATGCCAACTGGTGGAGGGAAGAGTTTGACCTATCAGCTCCCTGCTCTTATTTGTCCAGGTATAACACTGGTGATATCTCCCCTTGTGTCCCTTATACAAGATCAGATAATGCATCTATTGCAGGCAAATATACCTGCTGCTTACTTAAGTGCCAATATGGAATGGACTGAACAGCAGGAGATCCTTAGAGAACTTAATTCTGATTATTGTAAATTCAAGTTGTTATATGTGACTCCAGAAAAGGTTGCTAAAAGTGATGCTCTTCTGCGGCAGTTGGAGAGTTTGTATACTCGTGAATTGCTAGCAAGGATTGTAATTGATGAGGCTCACTGTGTGAGCCAATGGGGGCATGATTTTAGACCAGATTATCAGAGCCTTGGTATATTGAAACAGAAATTTCCAAATACTCCTGTTTTAGCTTTGACAGCTACAGCAACGGCCAGTGTAAAAGAAGATGTTGTGCAAGCTCTCGGTCTTGTCAACTGCATTATTTTCCGGCAAAGTTTTAATCGCCCAAACTTGTGGTATTCTGTTATTCCCAAGACCAAAAAATGTTTGGAGGATATTGACAAATTCATCAGGGAAAATCATTTTGATGAATGTGGAATTATCTATTGTCTTTCACGGATGGACTGTGAAAAAGTCGCTGAAAAGTTGCAGCAATGTGGACATAAAGCCGCATTTTATCATGGTAGCATGGATCCGGCTCAACGTGCGTTTGTTCAAAAGCAGTGGAGCAAAGATGAAATCAATATAATTTGTGCTACTGTGGCATTTGGAATGGGTATTAACAAACCTGATGTCCGTTTTGTAATCCATCATTCTCTCCCAAAATCAATCGAAGGCTACCACCAGGAGTGTGGACGAGCTGGTAGAGATGGTCAACGTTCATCCTGCCTGTTATATTATAGCTACAGTGACTATATACGAGTAAAGCATATGTTAAGTCAAGGAGCAATGGAGCAACAAAGTCCCTTCACAGGATACGGTCGTGCAAATATGACAAATTCAGGGAGGATACTGGAAACTAACACCGAAAATCTTTTGCGAATGGTCAGTTACTGTGAAAATGATGTTGATTGTCGGCGCCTTCTGCAGCTTGCTCATTTTGGGGAGAAGTTTGATTCTGCGACCTGTAAGAAAACATGTGATAATTGTTTGAAGATTAAAAGCTTTATTGAGAAGGATCTTACAGAGACCGCAAAGCAATTGGTTGAACTCGTTAAGCTAACGGGGCAGCAGTTCTCATCATCTCACATATTAGAAGTGTACCGTGGTTCCTTAAACCAGTTTGTCAAGAAACACCGACATGAGACTGTGAGACTTCATGGTGCTGGAAAGCATCTAGCTAAGGGTGAGGCTTCCCGTGTATTGCATCATCTTGTTGTTGAGGATTTTCTCGTGGAGGATGTTAAGAAAAGTGACATTTATGGATCAATCTCATCAATACTGAAGGTAAATGAGGCCAAGGTCCGTAGTCTGTTTGGTGGGCAGAGAATCATATTAAGATTTCCTTCCTCTGTAAAAGCATCCAAGCAGGGGAAACCTGAAGTAACCCCGGCTAAAGGCTCTATGACTTCTGGGAAGCCGAGTCTTCCACTGATTGATACTCCTGCCCAACCTCAAAGTGAAACAGACTTGGATCTTTCAGCTAAATTATACTCTGCTCTGCGGATGCTGCGGACAGCTCTTGTTAGAGAAGCTGGAGAGGGTGTTATGGCTTATCACATATTTGGTAACGCTATACTGCAGCTGATAAGCAAGAGAGTGCCCAGAACAAAGGAAGAACTCCTTGAGATCAATGGCATTGGCAAGGCTAAGATAAGCAAGTATGGAGACCGGGTACTGGAAACAATTGAAAAGATTATAGAGGAGTATTACAAGTTTGGCAAGAACAGCAGCAGTAGCAAGGAGAGCACTGATTCTGCCAAAAGGAGACGAGAGGCATTAGGAAACCTGAATCCAACTTTGGAGGATGATGATGTGATCAATAGTACTACCTGTTCAAAGAGAAGGACGACGAAGAAACCAAATAGAAAAACTGAGGTGCATGAATCTGCAGAGGAAGACTTCTACGTTGACTGTTTAAATGATGACTTAGATTTTGAGAAGTTGGAAGATGATGCATTGGATAAAGTGACTCTTAAAAATGCTTTAGGAAGGGTCTTACCTCAATGGACATCATCATCTTGAAATGGTATATCACCTCTTGCACTAATTTAGGCTTGGTGGAACAAAGCCTTTGTTCCGTCCGTAACAATGGAAGATATCTTGCCAATACAAATCAACAATGAAAAAAGAATTTATTTTGAATGGCTGCATCTTTTTACTAAA 3729 0.4119 MRQGQSKSAVGVKCDDKLPKVNWLEHARAHDNFSCQNKFLNSNFLFSLPTQKPCSQEATDGGFVAGQSHSIERSQRGQVEKAWHALSSLQISCRSYTKPGKTVQITPPLHEEGRINSFQKASENDRCSPNLQNHKFVRENNAKSNQYFASSNASAEDEGNSVRYSDDTRTPTVNSHCSRVLDGSVNVHTKYTGQNKDSTKCMADDIDGDDDDFLKNIDVDQIVENYQSSCTPQPPVSKFPPITPAIDKNNFAGQEENCLPPELCSDCIHGYKVGLCPEAANHLQEFKDNLIAISNELLDNADNLNPTEIARLRQDRSQLNKQIQQLERYLHSSNLDAERQKSHFSASTAPPASFLFETPHQSVSRSETVRYDTQVYTGNESYGSFSAVDKYGMSAGPVEREAYIPKIIDVNYIEGSGDERWRSQNFPWTKKLEANNKKVFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALICPGITLVISPLVSLIQDQIMHLLQANIPAAYLSANMEWTEQQEILRELNSDYCKFKLLYVTPEKVAKSDALLRQLESLYTRELLARIVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNTPVLALTATATASVKEDVVQALGLVNCIIFRQSFNRPNLWYSVIPKTKKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVAEKLQQCGHKAAFYHGSMDPAQRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCLLYYSYSDYIRVKHMLSQGAMEQQSPFTGYGRANMTNSGRILETNTENLLRMVSYCENDVDCRRLLQLAHFGEKFDSATCKKTCDNCLKIKSFIEKDLTETAKQLVELVKLTGQQFSSSHILEVYRGSLNQFVKKHRHETVRLHGAGKHLAKGEASRVLHHLVVEDFLVEDVKKSDIYGSISSILKVNEAKVRSLFGGQRIILRFPSSVKASKQGKPEVTPAKGSMTSGKPSLPLIDTPAQPQSETDLDLSAKLYSALRMLRTALVREAGEGVMAYHIFGNAILQLISKRVPRTKEELLEINGIGKAKISKYGDRVLETIEKIIEEYYKFGKNSSSSKESTDSAKRRREALGNLNPTLEDDDVINSTTCSKRRTTKKPNRKTEVHESAEEDFYVDCLNDDLDFEKLEDDALDKVTLKNALGRVLPQWTSSS 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00619 1195 SMART ultradead3 441 644 IPR014001 -
Bach11g00619 1195 NCBIfam RecQ family ATP-dependent DNA helicase 437 912 IPR004589 GO:0004386|GO:0006310
Bach11g00619 1195 SMART RQC_2 861 971 IPR018982 GO:0006260|GO:0006281|GO:0043138
Bach11g00619 1195 FunFam ATP-dependent DNA helicase RecQ 418 635 - -
Bach11g00619 1195 Gene3D - 636 854 IPR027417 -
Bach11g00619 1195 CDD SF2_C_RecQ 636 768 - -
Bach11g00619 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 777 IPR027417 -
Bach11g00619 1195 ProSiteProfiles Rhodanese domain profile. 668 710 IPR001763 -
Bach11g00619 1195 FunFam Bloom syndrome, RecQ helicase 636 856 - -
Bach11g00619 1195 MobiDBLite consensus disorder prediction 976 997 - -
Bach11g00619 1195 SMART helicmild6 678 759 IPR001650 -
Bach11g00619 1195 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 634 902 IPR027417 -
Bach11g00619 1195 Gene3D - 410 635 IPR027417 -
Bach11g00619 1195 SMART hrdc7 1012 1094 IPR002121 GO:0003676
Bach11g00619 1195 Pfam HRDC domain 1016 1084 IPR002121 GO:0003676
Bach11g00619 1195 Coils Coil 309 329 - -
Bach11g00619 1195 Pfam Helicase conserved C-terminal domain 652 758 IPR001650 -
Bach11g00619 1195 ProSiteProfiles HRDC domain profile. 1012 1094 IPR002121 GO:0003676
Bach11g00619 1195 PANTHER DNA HELICASE RECQ FAMILY MEMBER 416 1102 - -
Bach11g00619 1195 SUPERFAMILY HRDC-like 1015 1089 IPR010997 GO:0000166|GO:0044237
Bach11g00619 1195 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 453 628 IPR014001 -
Bach11g00619 1195 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 567 576 IPR002464 -
Bach11g00619 1195 Pfam RQC domain 858 973 IPR018982 GO:0006260|GO:0006281|GO:0043138
Bach11g00619 1195 Gene3D - 859 968 IPR036388 -
Bach11g00619 1195 MobiDBLite consensus disorder prediction 150 175 - -
Bach11g00619 1195 CDD DEXHc_RecQ 433 635 - -
Bach11g00619 1195 Gene3D HRDC domain 1008 1093 IPR044876 -
Bach11g00619 1195 Pfam DEAD/DEAH box helicase 447 615 IPR011545 GO:0003676|GO:0005524
Bach11g00619 1195 Pfam RecQ zinc-binding 770 852 IPR032284 -
Bach11g00619 1195 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 653 814 IPR001650 -
Bach11g00619 1195 MobiDBLite consensus disorder prediction 1115 1149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00619 Bach-Chr11 4702303 4710230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00619 668 772 Eukaryotic Initiation Factors Gene Family AT1G72730 23.810 5.81e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00619 K10901 - qsa:O6P43_031507 1701.8