Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00607 ATTCGCTGACATTGGGGATACGAGGGTAGCTGCGGAGCTCAAGGGAGTAGGAAGAGATGGAGACTCAGTTCAGTCACAGTCTCTTCGAAAGGCGCCCCATCTTCAAGTCCAAGAGCCCCGCCGTTAAATGGGTCAAGGAATGGGTTCCCCAAGATCTTGTAGCAACTGGTGGGAAGTGCATGATCTTAAGATGGGTAGCAGAGGATACATTGAAGGCCTTGAAAGAGAAGTCAAAAGAGCCAGCAGCACCTGAGCCAGAACCAGAGCCAACCACTGAAGTACTTTTCCTCTGCAGCTATGAAGGCTGCGGAAAGACTTTCATAGATGCTGGTGCTTTGAGGAAGCATTCTCACATCCATGGAGAAAGACAATTTGTTTGTCATTATGACGGATGTGGAAAGAAATTTCTGGATAGCTCAAAGTTGAAAAGACATTTTCTCATTCATACAGGGGAGAGGGATTTTATTTGTCCTCATGAAGGCTGTGGTAAGGCCTTTTCCCTGGATTTTAATCTAAGGTCTCACATGAAGACACATTCACAAGAAAACTATCATATCTGCCCATACCATGATTGCGGAAAGAGATACGCTCACGAATACAAGTTAAAGAATCACATTGCTTCTCACCATGAAAAGAATGCGTCAGTGGATGTGGCAAAGTATACTACTCCACCTCCAGAGAAGCAAACAAAAGCTACAAAACCTTCTGGAGGCACTTACGGTTCTGCATCATCTGATCGTCCTTATGCATGCCCTTATGAAGGGTGTGAAAAAGCCTATATCCATGAATACAAGCTTAAACTCCATTTGAAGAGGGAGCACCCTGGTCACATGTCCGACGAAAATGCAGAGAATGCTCAGGCTAATGCTGACAACGAAATGGATGAAGCCAGTGACCAAGATGCCTATGGTGGAAAACGAGCAAATGGTAAAAGTCAGAAGCAAAGCAAGCCCAAACCAAACTTGAAGCTTCCTCCTTCAAAGACTGCACAACGCAAAGGGTCAGCTCCTTCTTCTGCCCCTTTGAATGTAATAAAAAAACCTTGGCCTGTAAAAGATGAAGCTTATGAGGAAGAAGATAGTGAAGAAACCGAAGAGGATCGAGACAATGTTGAGGATGGTTGGAGATATGCAGGAAACAATGAAGATGATGATGAAGAAACAGAGTACGAAGACTGAAACTTAGTTGTGGTGTGGCATCTTGATCTTCCACAAAATCTATGTTTTTCTTTTATGTAGTTTAGAGAAGGGTATGGTCTTGTTACACAGTATATATTTTGAACAATCAGAAATGATACAATTGACGAATTCATATTAGTACGAGGGATGTAATTCTTTTTGTTTTTTTGATCTCTCATAATTTTTACTTTTATTTTTCTCTTTTCCCTGATTCCCTTCTTTGCATTTGGACAGTTATTGTAGTTGTTGAGCTGATAACATGTATACT 1446 0.4191 METQFSHSLFERRPIFKSKSPAVKWVKEWVPQDLVATGGKCMILRWVAEDTLKALKEKSKEPAAPEPEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQFVCHYDGCGKKFLDSSKLKRHFLIHTGERDFICPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYHDCGKRYAHEYKLKNHIASHHEKNASVDVAKYTTPPPEKQTKATKPSGGTYGSASSDRPYACPYEGCEKAYIHEYKLKLHLKREHPGHMSDENAENAQANADNEMDEASDQDAYGGKRANGKSQKQSKPKPNLKLPPSKTAQRKGSAPSSAPLNVIKKPWPVKDEAYEEEDSEETEEDRDNVEDGWRYAGNNEDDDEETEYED 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00607 373 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 18 348 - -
Bach11g00607 373 MobiDBLite consensus disorder prediction 207 224 - -
Bach11g00607 373 Pfam Zinc finger, C2H2 type 136 160 IPR013087 -
Bach11g00607 373 MobiDBLite consensus disorder prediction 336 350 - -
Bach11g00607 373 FunFam zinc finger transcription factor YY1 77 102 - -
Bach11g00607 373 ProSitePatterns Zinc finger C2H2 type domain signature. 79 101 IPR013087 -
Bach11g00607 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 106 IPR013087 -
Bach11g00607 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 230 260 IPR013087 -
Bach11g00607 373 Gene3D Classic Zinc Finger 203 274 - -
Bach11g00607 373 FunFam Zinc finger protein 410 134 161 - -
Bach11g00607 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 136 165 IPR013087 -
Bach11g00607 373 ProSitePatterns Zinc finger C2H2 type domain signature. 138 160 IPR013087 -
Bach11g00607 373 FunFam zinc finger transcription factor YY1 163 194 - -
Bach11g00607 373 SUPERFAMILY beta-beta-alpha zinc fingers 225 253 IPR036236 -
Bach11g00607 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 166 195 IPR013087 -
Bach11g00607 373 SMART c2h2final6 166 190 IPR013087 -
Bach11g00607 373 SMART c2h2final6 136 160 IPR013087 -
Bach11g00607 373 SMART c2h2final6 230 255 IPR013087 -
Bach11g00607 373 SMART c2h2final6 77 101 IPR013087 -
Bach11g00607 373 SMART c2h2final6 106 130 IPR013087 -
Bach11g00607 373 Coils Coil 261 281 - -
Bach11g00607 373 SUPERFAMILY beta-beta-alpha zinc fingers 80 130 IPR036236 -
Bach11g00607 373 MobiDBLite consensus disorder prediction 257 373 - -
Bach11g00607 373 FunFam Putative zinc finger protein 143 103 133 - -
Bach11g00607 373 SUPERFAMILY beta-beta-alpha zinc fingers 117 170 IPR036236 -
Bach11g00607 373 ProSitePatterns Zinc finger C2H2 type domain signature. 168 191 IPR013087 -
Bach11g00607 373 MobiDBLite consensus disorder prediction 201 227 - -
Bach11g00607 373 ProSitePatterns Zinc finger C2H2 type domain signature. 232 255 IPR013087 -
Bach11g00607 373 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 135 IPR013087 -
Bach11g00607 373 Gene3D Classic Zinc Finger 77 102 - -
Bach11g00607 373 Gene3D Classic Zinc Finger 134 161 - -
Bach11g00607 373 ProSitePatterns Zinc finger C2H2 type domain signature. 108 130 IPR013087 -
Bach11g00607 373 Gene3D Classic Zinc Finger 103 133 - -
Bach11g00607 373 Gene3D Classic Zinc Finger 163 195 - -
Bach11g00607 373 FunFam Zinc finger transcription factor YY1 205 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00607 Bach-Chr11 4612063 4615418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00607 10 359 C2H2 Transcription Factor Family AT4G06634 65.940 7.28e-148 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach11g00607 zf-C2H2 0.00097 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00607 - - qsu:111997563 613.994