Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00584 ATGGCAATATCTGATGAGAAGCAAAGAATAGTGCCAATGCCAGAAGATCTACTTCCAGGTAGAGGCCAACAGTTGAAATTACCTGAATCAGTTTTGCTGATAAATCCTATTAATCCTGATCTCAAAGGCGAGGTTGATGACAAGTACCATTATGAGTTCCGTAATGGTGGCCCAACCAAGCAAAATCTCACAGTTCATACTGGACCCTACTGCCTTGCTATGTTTCATACGACACATTACATTGGGGATGATATATTAGCTAAATTTGAAGAGGGAGAGACATGGAAGAAAGTCTTTGGCCCCTTCTTTGTTTACCTCAATTCCACCTCAGACGTGTCAGATGCACACAACTTGTGGTTGGATGCAAAAAAGCAGAGGATACTTGAAGAGAAAGCCTGGCCTTACAATTTTGTTGCAGCACCCTATTATTTCACTGCTAAAGAACGTGCTTCGGTTACTGGCAGATTGTATATCGTGTCTGAGTCTCTTATCCCAGCTAAATATGCATATGTTGGTCTATCAACCGCAACAACTGAAGGGTCTTGGCAGATAGAAAGCAAGGATTATCAGTTCTGGGTTCAAACAGATTCAAATGGAAATTTCAGCATCAAGAATGTTATCCCTGGAGTTTATGCACTTCATGGGTGCGTACCTGGCTTCATTGGTGATTACATGCATAACTCAGTCTTTACCATTTCAACAGGTTCAGAGACAAAACTAGGCAATTTGATATTTGTTCCCCAAAGAGATGGTCCTACTTTGTGGGAGATTGGCTTCCCTGATCGTTCAGCTATTGATTTCTTTGTTCCCGATGTCAAGATGAAGTATGTCAACAAGTTATGTCTACATAGTCCTGAGAAATTTAGGCAATATGGCTTGTATATACACCCAGAATTTGATCACGTTTTCACTATAGGTGTCAGCAATCCAAACAAAGACTGGCTTTTTGCTCATGTAGACATGAGAGGAACGGATGGCAAGTATCGGCCATCAACATGGAAAGCAAATTTTAATCTCAGAGCAGTAACCACTGGAACATACAAGCTTAGGTTGGCCATTGCTTCAGCAACACGTTCAGATCTCGAGCTCCATGTCAATTACTTGGATACAAAGCACCAGGTATTCCAAGTAACGAACTTGGGGACAGATAACACAACCTGTCGACATGGAATACATGGACTCTACCGGCTCTTCAGCATTGACATTCCCTCTTCATTGCTAGTAAAGGGTGACAATTCAGTAATTCTTACACAGGCTAGAGGGGGAGATTCGCTTTGTGGGATTTTCTATGACTATATGAGATTGGAAGCTCCTGAAACTAAAGATAAAGAGACACTCGTGCCCTTAATCGAGAAATAA 1359 0.4157 MAISDEKQRIVPMPEDLLPGRGQQLKLPESVLLINPINPDLKGEVDDKYHYEFRNGGPTKQNLTVHTGPYCLAMFHTTHYIGDDILAKFEEGETWKKVFGPFFVYLNSTSDVSDAHNLWLDAKKQRILEEKAWPYNFVAAPYYFTAKERASVTGRLYIVSESLIPAKYAYVGLSTATTEGSWQIESKDYQFWVQTDSNGNFSIKNVIPGVYALHGCVPGFIGDYMHNSVFTISTGSETKLGNLIFVPQRDGPTLWEIGFPDRSAIDFFVPDVKMKYVNKLCLHSPEKFRQYGLYIHPEFDHVFTIGVSNPNKDWLFAHVDMRGTDGKYRPSTWKANFNLRAVTTGTYKLRLAIASATRSDLELHVNYLDTKHQVFQVTNLGTDNTTCRHGIHGLYRLFSIDIPSSLLVKGDNSVILTQARGGDSLCGIFYDYMRLEAPETKDKETLVPLIEK 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00584 452 SUPERFAMILY Starch-binding domain-like 144 240 IPR013784 GO:0030246
Bach11g00584 452 CDD RGL4_C 255 436 - -
Bach11g00584 452 CDD RGL4_M 148 243 IPR029413 -
Bach11g00584 452 SUPERFAMILY Galactose-binding domain-like 250 436 IPR008979 -
Bach11g00584 452 Pfam Rhamnogalacturonate lyase family 1 45 IPR010325 -
Bach11g00584 452 Pfam Polysaccharide lyase family 4, domain II 168 240 IPR029413 -
Bach11g00584 452 Pfam Polysaccharide lyase family 4, domain III 253 435 IPR029411 -
Bach11g00584 452 Gene3D - 145 241 - -
Bach11g00584 452 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 1 51 - -
Bach11g00584 452 Gene3D - 251 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00584 Bach-Chr11 4443531 4446401 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00584 1 438 Polysaccharide Lyase AT4G24430 45.208 7.25e-148 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00584 K18195 - qsa:O6P43_011933 690.649