Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00579 ATGGATAGAAAACCAGAAGAGAGAGACTTGGAGATAGAAGGTATGACCATGGGGTGTGATGGAAAAGAAGACAGATTGGAGACGGATGGTTCATGGTTAGTTGATGAGAAAGACAGACTCAGAGAGCCATTTCTTCTGAAGAATAGTAGGAGAAACAACACTTCACAGCTCGCCATTGTTGGAGCCAATGTCTGCCCCATTGAAAGTCTTGATTACGAGATCATTGAGAATGATCTTTTTAAGCAAGACTGGCGGTCTAGAACAAAGGTTGAAATATGCCAGTATATCGCCCTGAAATGGACACTTGCACTTCTTATTGGTTTAGGTACAGGACTCGTAGGCTTCTTCAACAACCTTGCTGTTGAGAACATTGCTGGTTTCAAACTTCTGCTTACCAACAATCTTATGCTCAAAGAAAGGTATCATCTGGCTTTTGCAGCATTTGCTGGTTGTAACATTAGTTTGGCCATTGCTGCTGCAGTTCTCTGTGCCTATATTGCACCTGCAGCAGCAGGTTCTGGCATACCTGAGGTGAAAGCATACCTCAATGGTATAGATGCTCATTCTATATTGGCCCCAAGTACCCTCTTTGTGAAGATTTTTGGTTCAGTCTTCGGAGTTGCTGCGGGATTAGTTGTGGGTAAGGAAGGACCTATGGTACATACTGGTGCTTGCATAGCTAATTTACTTGGACAAGGTGGCTCTCGAAAATATCATTTGACCTGCAGGTGGCTTAGATATTTTAAAAATGACCGAGATCGAAGGGATTTGATTACCTGTGGGGCAGCTGCTGGAGTTGCTGCTGCCTTCCGTGCTCCAGTTGGTGGGGTCCTTTTTGCACTTGAGGAAGCAGCTTCATGGTGGAGGAGTGCTCTTCTATGGCGGACTTTCTTTACTACAGCTGTGGTAGCAGTAGTACTGAGAGGTTTCATGGAATTTTGCCGGGATGGGAGATGTGGTCTTTTTGGGGAAGGAGGTCTGATAATGTTTGATGTTAATTCAGCAAAGCCTGCATACAGCGTGCCCGACTTGCTAGTAGTTATATTTCTTGGAGTTATTGGAGGCGTTTTGGGAAGCCTTTACAATTTTCTTATTGACAAGGTCCTTCGCACATACAGCGTGATCAACGACGATGATGCTATTCGCAACCTGTTTGTCTCCGGCACTGAGAAGGAATTCCAGCTTTCCAATCTTCTAATTTTCTTTGTGGCCATATACTTCCTTGGAATTATCACATATGGCATTGCTGTTCCCTCTGGCCTTTTCATTCCTGTTATACTTGCTGGAGCTTCATATGGACGTCTTGCAGGAAGACTTCTAAGTTCAATCACTGTTCTTGATGTCGGTTTGTTTGGACTCCTTGGAGCTGCATCCTTGCTTGGTGGCACTATGAGAATGACTGTTTCTCTTTGTGTTATACTTCTTGAACTTACTAATGACCTCTTGATGCTTCCATTGGTCATGCTTGTTCTCCTTATTTCAAAGACTGTAGCTGATAGCTTCAACAGTGGTGTTTATGACCAGATTGTGAAAATGAAGGGTCTACCTTATCTGGAAGCACATGCAGAACCATATATGAGGCAATTAACTGTAAGCGATGTCGTTTCAGGACCATTGGTTACACTTTCAGGGGTTGAAAAAGTGAAGAATATAATGCGTGCTTTGAGGGTAACAGGGCATAATGGGTTTCCTGTAATTGATGAGCCTCCTTTTACTGATGCCCCTGAGTTGTGTGGGTCGGTCTTGAGGTCACATCTTCTTGTACTGCTTAAGAACAAGAGGTTCTCAAAGCAGAAGGGTCTGACCAGTTCTGCCGTTATGAGGAACTTCAAGGCACATGATTTCGGGAAGCCAGGATCAGCCAAGGGGCTAAAGGTAGAGGATTTGGACATTAATGAGGATGAGATGGAAATGTACGTTGATCTCCATCCAATTACTAATAGGTCACCATATACAGTTGTGGAAACAATGTCTCTAGCAAAAGCTGCAATTCTCTTCCGGCAGCTTGGCCTCAGACACTTGTTGGTGGTGCCAAAGACAACCGGAAGGCCTCCGATTGTTGGAATACTGACAAGGCATGATTTAATGCCTGAGCATGTATTGGGATTATACCCACATTTGAACCATCACAAATAG 2136 0.4396 MDRKPEERDLEIEGMTMGCDGKEDRLETDGSWLVDEKDRLREPFLLKNSRRNNTSQLAIVGANVCPIESLDYEIIENDLFKQDWRSRTKVEICQYIALKWTLALLIGLGTGLVGFFNNLAVENIAGFKLLLTNNLMLKERYHLAFAAFAGCNISLAIAAAVLCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSVFGVAAGLVVGKEGPMVHTGACIANLLGQGGSRKYHLTCRWLRYFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGFMEFCRDGRCGLFGEGGLIMFDVNSAKPAYSVPDLLVVIFLGVIGGVLGSLYNFLIDKVLRTYSVINDDDAIRNLFVSGTEKEFQLSNLLIFFVAIYFLGIITYGIAVPSGLFIPVILAGASYGRLAGRLLSSITVLDVGLFGLLGAASLLGGTMRMTVSLCVILLELTNDLLMLPLVMLVLLISKTVADSFNSGVYDQIVKMKGLPYLEAHAEPYMRQLTVSDVVSGPLVTLSGVEKVKNIMRALRVTGHNGFPVIDEPPFTDAPELCGSVLRSHLLVLLKNKRFSKQKGLTSSAVMRNFKAHDFGKPGSAKGLKVEDLDINEDEMEMYVDLHPITNRSPYTVVETMSLAKAAILFRQLGLRHLLVVPKTTGRPPIVGILTRHDLMPEHVLGLYPHLNHHK 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00579 711 Pfam Voltage gated chloride channel 156 373 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach11g00579 711 Pfam Voltage gated chloride channel 376 499 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach11g00579 711 SUPERFAMILY CBS-domain pair 522 696 IPR046342 -
Bach11g00579 711 FunFam Chloride channel ClC3 91 377 - -
Bach11g00579 711 CDD ClC_6_like 68 518 - -
Bach11g00579 711 PRINTS Plant CLC chloride channel signature 284 292 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bach11g00579 711 PRINTS Plant CLC chloride channel signature 298 308 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bach11g00579 711 PRINTS Plant CLC chloride channel signature 316 323 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bach11g00579 711 PRINTS Plant CLC chloride channel signature 73 81 IPR002251 GO:0005247|GO:0006821|GO:0016020
Bach11g00579 711 SMART cbs_1 538 591 IPR000644 -
Bach11g00579 711 SMART cbs_1 649 700 IPR000644 -
Bach11g00579 711 Gene3D - 519 701 IPR046342 -
Bach11g00579 711 ProSiteProfiles CBS domain profile. 646 708 IPR000644 -
Bach11g00579 711 Gene3D Clc chloride channel 91 371 - -
Bach11g00579 711 Gene3D Clc chloride channel 372 518 - -
Bach11g00579 711 PRINTS Chloride channel signature 449 465 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach11g00579 711 PRINTS Chloride channel signature 505 519 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach11g00579 711 PRINTS Chloride channel signature 168 185 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach11g00579 711 PRINTS Chloride channel signature 467 486 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach11g00579 711 PRINTS Chloride channel signature 199 218 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach11g00579 711 PRINTS Chloride channel signature 263 282 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Bach11g00579 711 CDD CBS_pair_voltage-gated_CLC_euk_bac 530 698 - -
Bach11g00579 711 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 46 376 - -
Bach11g00579 711 Pfam CBS domain 647 696 IPR000644 -
Bach11g00579 711 SUPERFAMILY Clc chloride channel 77 521 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00579 Bach-Chr11 4409376 4413262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00579 361 711 Ion Channels AT5G49890 74.929 2.00e-167 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00579 K05016 - twl:120004233 1022.31