Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00575 CGGCTTCAACCAAACACGACCTTATCAACGATCTCGTCCATCGAATTTCGATATACCCTTTTCTATTTTCTTTCTTCTTCTGTCAAAAACCCTAGCAACTTGTTCCTGTTTGGACACTGGGAACCGGAGGGCAACGACTTGAAGATTTCAACAAAGAGTTCTCCTAGATTCTGTGCTCTCTTGAAGATTTCTTGTGCGGTTCTCTTATGGCATTTATGGCTTCAAATCAGACATTTGGTGGAAATCATGCAGGGGCATCCAATGATGCTTTATACAAGGAATTATGGCATGCCTGTGCGGGTCCCCTTGTTACTCTTCCTCGTGAAGGGGAACGAGTTTATTACTTTCCACAAGGTCACATGGAACAGCTCGAGGCTTCCATGCATCAGGGATTAGAGCAGCAAATTCCTTCCTTCAATCTGCCTTCTAAAATTTTATGTAAAGTGGTCAACGTTCATCTTCGGGCTGAACCTGAAACAGATGAAGTATATGCACAGATAACTTTGCTTCCTGAAGCAGATCCAAGTGAGTTGACAAGCCCAGACGATCCTCTGCCAGAGCCTCCAAGGTGCACAGTCCATTCATTTTGCAAGACACTTACTGCTTCTGACACCAGCACACATGGAGGTTTCTCTGTTCTCCGGAGACATGCAGATGATTGTCTGCCACCACTGGATATGTCTCAGCAGCCACCATGGCAAGAATTGGTTGCAACTGATTTGCATGGAAATGAATGGCATTTTCGGCATATTTTTCGAGGGCAACCTAGGCGCCACTTACTTACTACTGGGTGGAGTGTCTTTGTTAGTTCCAAAAAATTAGTGGCTGGTGATGCATTTATATTCCTAAGAGGTGAAAATGGAGAGCTGCGTGTTGGAGTTAGGAGGCTTATGAGACAGCAAAACAATATGCCTTCTTCTGTCATTTCTAGTCACAGTATGCATCTTGGTGTTCTGGCAACTGCATCTCATGCCATTGCCACTGGAACACTGTTTTCTGTATTTTACAAGCCCAGAACAAGCCGATCAGAGTTTATTGTGAGTGTCAACAAGTATCTTGAAGCTCGTAGTCATAAGCTTTCTGTTGGGATGAGGTTCAAGATGAGATTTGAGGGTGATGAAGTCCCTGAAAGAAGGTTCAGTGGCACAATTGTGGGTGTTGGAGATAATAAATCACCTGTATGGGCTGATTCTGAGTGGCGATCCCTAAAGGTTCAATGGGACGAACCTTCATCAATTTTGCGCCCAGATAGGGTTTCTTCATGGGAATTGGAGCCACTTGTTGCGACTACTCCTGCTAACTCCCAACCCTCCCAAAGAAACAAGAGGGCACGGCCTCCTATTCTACCTTCAACAATGCCTGATTCTTCTGTGCATGGTGCGTGGAGAGCACCAGTTGAATCTTCACCTTTCTCATATTCATCGCCCAAGTTCAATTCTGCTGCAACTAGTTTTCTTGGTTTTGGTGGGAATAGCTCTCTGGGAACTGTTTCCAACAATTCAATTTATTGGTCTAACAGGTTGGAGAACTCTACTGAGTCTTTAGCCCCCAAAGAATCTGGTGAGAAGAGACAAGCAACTGGAAATGGCTGCAGGCTTTTTGGGATTCAGCTGCTTGATAATTCTAACATAGAAGAAAGTACGCCAGCAGTTACATTCTCAGGAAGGATGGCAGATGATGGGCCCGTTCCATCTCTAGATGTGGAGTCTGACCAGCATTCAGAACCATCAAATGTAAATCGATCAGATGTTCCTTCAGTGAGTTATGATGCTGAAAAATCATGCCTAAGGTCTCCTCAGGAGTCACAAAGCAGGCAAATAAGGAGCTGCACAAAGGTTCATATGCAAGGAATGGCTGTTGGGAGGGCTGTGGATTTGACACGGTTTGATGGATATGAGGATCTACTTAGGAAAATGGAGGATATGTTTGACATCAAGGGTGAGCTTTCTGGATCCACAAAAAAATGGCAGGTTGTCTACACTGATAATGAAGACGATATGATGATGGTTGGAGATGATCCATGGCTTGAATTCTGCAACGTGGTAAGGAAAATTTTCATCTACACCACAGAAGAGGTGAAGAATCTTTCCCCCAAAATAGGACTTCCAATAAATGATGAAGCTAAACCAGGCAAGCTGGATGCTGAAGCAGCAGTCAATACTGAGGACCAATCATCTATTGTAGGGCCTGGCTGCTAATCTAGGTCTTCCACTATAATCCTAGTTGTTATACAATAAATATGGCTATGGAACTAGAAAATAGAACATTGAAAGAAAGAAGAATGAACTTCTCAAGCTCTTCATCCTAGTCTACGGGAGCTTATCACTGGTGTATCTTGCGTCTATGCTGGCATGGCTTCACCTCGAGACTAGCAGCATGGCACCACCGGTATGGAGGGCTGGTTTTAGTATACTGCTGTTTGATCTGCCTTAAAGATAGGCTGCGGGTATTCTGGTATTTTCATTTCTTCCACGGCTTGGTCTATGCCGAGTGTCTTGTGGACCATGCTTGTTCAGTTTTGAATGGGCTGCGAGAATGAAGAAATGTGATTGTCTTTGCTCGTGAATCTTGATGTGTATGGCATTGCTATTTTCTTGTAACCTTTCTTTTTGTTAAATCACTTGGAAGTGATGCTTCTTGCATTTTTGTATATAAATTTTTATAATCTTTAGACACACTATTTAATGTATGTATTGTTGGAAATCCCTA 2709 0.4337 MAFMASNQTFGGNHAGASNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMHQGLEQQIPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLPEADPSELTSPDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQNNMPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSPVWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVATTPANSQPSQRNKRARPPILPSTMPDSSVHGAWRAPVESSPFSYSSPKFNSAATSFLGFGGNSSLGTVSNNSIYWSNRLENSTESLAPKESGEKRQATGNGCRLFGIQLLDNSNIEESTPAVTFSGRMADDGPVPSLDVESDQHSEPSNVNRSDVPSVSYDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKMEDMFDIKGELSGSTKKWQVVYTDNEDDMMMVGDDPWLEFCNVVRKIFIYTTEEVKNLSPKIGLPINDEAKPGKLDAEAAVNTEDQSSIVGPGC 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00575 663 Pfam AUX/IAA family 536 629 IPR033389 -
Bach11g00575 663 Pfam B3 DNA binding domain 127 227 IPR003340 GO:0003677
Bach11g00575 663 SMART B3_2 127 229 IPR003340 GO:0003677
Bach11g00575 663 FunFam Auxin response factor 125 229 - -
Bach11g00575 663 SUPERFAMILY DNA-binding pseudobarrel domain 116 256 IPR015300 -
Bach11g00575 663 FunFam Auxin response factor 534 628 - -
Bach11g00575 663 Pfam Auxin response factor 253 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach11g00575 663 CDD B3_DNA 125 227 IPR003340 GO:0003677
Bach11g00575 663 Gene3D - 290 363 - -
Bach11g00575 663 Gene3D - 124 229 IPR015300 -
Bach11g00575 663 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 20 628 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bach11g00575 663 SUPERFAMILY CAD & PB1 domains 541 616 - -
Bach11g00575 663 FunFam Auxin response factor 290 362 - -
Bach11g00575 663 ProSiteProfiles PB1 domain profile. 539 632 IPR000270 GO:0005515
Bach11g00575 663 MobiDBLite consensus disorder prediction 481 517 - -
Bach11g00575 663 Gene3D - 534 628 - -
Bach11g00575 663 MobiDBLite consensus disorder prediction 360 392 - -
Bach11g00575 663 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Bach11g00575 663 MobiDBLite consensus disorder prediction 501 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00575 Bach-Chr11 4366525 4373542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00575 4 657 B3 DNA Binding Superfamily AT1G59750 72.424 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach11g00575 AUX_IAA 2.3e-11 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00575 K14486 - gmx:100793224 1169.07