Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00565 ATGTCAGAAATGCGAGTTTCTGATCCAAGCAAGCTCCACTTGAAGAAGGAGCTCCATCAAATTCGTAAAGCTGCTCGTGTATTAAGGGATCCTGGTACAACCTCTTCCTGGAAGTCGCCACTTAGCTCCTCAAGATCTGTGGCAGCTGCTTCTGCTTCTGCTTCTGCATGGAGGATTAACTTGGAGAATGACAGTAAAAGGTTGAATGGCAATTCCCAACATGATTCTCAGTTCAATCTGCAAAATGGAAACTATAAGAACAACAATGGGAAAGATAAGAAGGTGTTCCTGTACAATTGGAAGAACTACAAATCGTCGAGCGAAAAGAGTGGAAGGGCCAAAAACAATGAAGACTATGAAGAAGAAGAAGATGCTGGTGGCAATGATGGATCTTCGTCTCTTCTGGGGAGCTTCGAGGATAGCCTCAGTGATGCTCGCAATGGCTGTGATTCAAAGAGCGATACTTACTTGGGGGGTGGTGGGACTCGTTCTTCCATCTTCCGTTGTAGAGATGCAAATCTTGTTTCGTTTGGGACACCCAGAAGAGGACTGGGCATTAAGAAAAAGAGTAAGAAAAATAACACCCATTTGGATATTTTAACTAAATATCAACAACGAGAAACCAATCTAGCCAGGAAGGTAGTAAATTCCAAAACTTTTCTAGAGGGGCATCCTTCAATGGCTTTTAGCAGGGATGACTCAGTTGAGCAATCTGATGATACTGAAGATTACTGTAATTCCGAGGATTTCAGGAGAATGTCTAGGCTCTCTCCTTTGCTTTTGAAACTAAAGCATAAGAATTGGTCTCGAAATTCCTCTAAGTTTTTGAGAACCAGTCGAAAAGAGGACTCTTCTTATAGTACCCCTGCATTGTCAACTAGTTCTTATAATAGGTATGGTCACTATAATCCTAGTACTGTTGGATCCTGGGATGGTACGACAACCTCAGTGAATGATGGTGATGATGAGGTTGATGATCATTTAGATTTGCCCGGCCGACAGGGATGTGGGATTCCTTGCTATTGGTCAAAGAGGACACCTAAACATAGAGGGATGTGTGGGAGTTGTTACTCTCCTTCTCTTTCAGACACTTTAAGGAGGAAGGGAAGTAGCATCCTCTGTGGTAGTCAAACTATCTATCCTAGACACCGGAGATCTTTATCAACTTCCAACAAGCGAAGAATTTCTTCAAGGAGTGCTCAAGGTGTTTTGCCATTGCTTACTAACAGTGGGGATATCAGAGGAGGGTCATCCCTAGGAACTGGACGGAGTGATGACGAACTTTCTACAAATTTTGAGGAGCTTGATCTTGAGGGTTTGAGCCGGTTGGATGGGAGAAGGTGGTCATCAAGTTGTAGGAGTCAAGAAGGATTAGAGATCGTTACTCTCAATGGGGAAGGGGATGAAGAAGGCACACCAGAAAATACTAGGAGTTTCAGTCAAAAGTATAAGCCTGTGTTCTTTGGCGAATTGATTGGGCAGAATATTGTTGTCCAGTCACTTTTAAGTGCTGTTTCAAGGGGAAGAATTGCTCCAGTTTATCTTTTCCAAGGTCCCCGGGGGACTGGTAAAACATCAACAGCCAGGATTTTTGCTGCTGCCTTGAATTGTCTGGCTCCTGATGACAGTAAACCTTGCGGGTACTGCAGGGAATGTACTGATTTTGTTTCTAACAAGAGCAGGAATCTGTTGGAAGTTGATGGAACCAATAAGAAAGGGGTAGATAGGGTTAGATATATATTGAAAAAATTGTCAGTAGGGTCATCATCAGCCTTCTCACGGTATATGTTTTTTGTTATTGATGAGTGTCACTTGCTACCCTCAAAGACTTGGTTGGCGTTTCTCCAGTTTCTTGAAGAACCACCACAGCGTGTTGTCTTCATATTTATAACAACAGATCCTGACAATGTGCCACGAACAATACAATCTCGATGCCAGAAGTACCTTTTTAACAAAATTAAAGATGGGGATATTGTGGCGAGGTTGAAGAAAATATCTGCTGAGGAGAATTTGGATGTTGAAAGAGATGCGCTGGACCTTATTGCTATGAACGCAGATGGTTCACTTCGAGACGCAGAAACTATGTTAGAACAGTTGAGTTTGCTGGGGAAAAGAATTACTACATCTCTTGTCAATGAACTTGTAGGTGTAGTTTCAGATGAAAAATTACTGGAACTATTGGAGTTAGCAATGTCATCAGACACTGCAGAAACAGTGAAAAGAGCCCGAGAATTGATGGATTCTGGAGTTGATCCAATGGTTTTGATGTCTCAACTGGCAAGCCTTATTATGGATATCATTGCTGGGTCATATACTGTCGTTGATGCAAAACCTGGTGATTCATTTTTTGGAGGACGAAGTTTGAACGAATCAGAGTTAGAGAGGTTAAAGCATGCTTTGAAGCTTCTCTCAGAGGCTGAGAAGCAGTTAAGAACTTCCAGTGAACGCTCAACATGGTTCACGGCAACTCTTTTGCAGCTTGGTTCAGTGCCTTCTACAGATCTTACTCAGTCAGGCAGTAGCAGGAGGCAGAGCTCCAAGACAACTGAAGATGATCCATCAAGTGCTTCTAGAGAAGTTACTGTTTACAAGCAGGGGTCAGATATTCAATATATGCCTCGAAAGTCAACGTCCCCTGCATACCTGCACAAAGTAGTAAATAGCAATCCCAACCATCAAAGGAATATATCGTCAAAGTTGGATGGTCTCAGCATGAATTCTAAGCCATCAAATAGTCCACTCAGGGATGATGGTGCCACATCTGTTTCATGTGATGATCTGGTTGGAAATATGATGTTTAGATGTGTAGATACTGAAAAGTTATTTGATATCTGGGCACGTTGCATTGGGAGGTGTCACTCAAAGACTTTGAGGCAGCTGCTATACAATCATGGAAAGCTTGTGTCTATATGTGAAGTGGAAGGTGTTTTGGTTGCATATGTTGCATTTGGGGATGGAGATATTAAACTTAGGGCGGAAAGGTTTCTAAGCAGCATTACAAACTCCATGGAAATGGTTCTTAGACGCAATGTGGAGGTCAGAATTATCCACTTGCCAGATGGGGAGGGTGAAATTCAGTTCAATCTACCAGGACCAAAGCAAGCAGAGTCAATAATGGCAAGTGAAAAGGAACGAAGAGGAGGTCATACGAATGGAACAGAAGGTTATTCTAATTTTCCTTCTCTGCTTGATGGAAACTTTCCATCTACCACCAATTCATCGGATGTACTGGCTGAAGACAATGGCATGAGAGAGCGGAGACAGGATCTTCCAATGCAGAGAATTGAATCCATTATCCGCGAACAGAGGCTAGAAACAGCATGGTTACAGGCTGTAGAAAAAGGTTCTCCAGGATCATTGAATCATTTAAGACCAGAGAGGAATCAAGTGCTGCCTCAGGAGGGTATCTATTGTAAAGACCAGATAGAGTCTATGGACTCAACAAGGTTTTCCTCTCAGCATTGGGAAGATGAACTCAATCATGAACTCAAAGTTTTGAAAGTTAAAAATGGTAGGGTCCCACAGAAGGATCAGGGTAGTAGAAGAGCTGATCATTGTCCGATGTCCCCAAGTTTATTGCATGATAGCAGTTTAGCAACCAATTCGATCAAAGACAATCTGGGATATGAATCAAGTACAGGACCTAAAGGATGTAGTGGACTTTTGTGCTGGAATAACTCTAAGCGTAAAAGGGTAAAGGTAATAGGTACCCCTGTCAGAGCACGTAAAGTTGGACGTTTTCCATTGTTTGGGGAGTGTGGTAAGTCAAAGAAAAAGCAGGCTGGAAGATAA 3792 0.4246 MSEMRVSDPSKLHLKKELHQIRKAARVLRDPGTTSSWKSPLSSSRSVAAASASASAWRINLENDSKRLNGNSQHDSQFNLQNGNYKNNNGKDKKVFLYNWKNYKSSSEKSGRAKNNEDYEEEEDAGGNDGSSSLLGSFEDSLSDARNGCDSKSDTYLGGGGTRSSIFRCRDANLVSFGTPRRGLGIKKKSKKNNTHLDILTKYQQRETNLARKVVNSKTFLEGHPSMAFSRDDSVEQSDDTEDYCNSEDFRRMSRLSPLLLKLKHKNWSRNSSKFLRTSRKEDSSYSTPALSTSSYNRYGHYNPSTVGSWDGTTTSVNDGDDEVDDHLDLPGRQGCGIPCYWSKRTPKHRGMCGSCYSPSLSDTLRRKGSSILCGSQTIYPRHRRSLSTSNKRRISSRSAQGVLPLLTNSGDIRGGSSLGTGRSDDELSTNFEELDLEGLSRLDGRRWSSSCRSQEGLEIVTLNGEGDEEGTPENTRSFSQKYKPVFFGELIGQNIVVQSLLSAVSRGRIAPVYLFQGPRGTGKTSTARIFAAALNCLAPDDSKPCGYCRECTDFVSNKSRNLLEVDGTNKKGVDRVRYILKKLSVGSSSAFSRYMFFVIDECHLLPSKTWLAFLQFLEEPPQRVVFIFITTDPDNVPRTIQSRCQKYLFNKIKDGDIVARLKKISAEENLDVERDALDLIAMNADGSLRDAETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELAMSSDTAETVKRARELMDSGVDPMVLMSQLASLIMDIIAGSYTVVDAKPGDSFFGGRSLNESELERLKHALKLLSEAEKQLRTSSERSTWFTATLLQLGSVPSTDLTQSGSSRRQSSKTTEDDPSSASREVTVYKQGSDIQYMPRKSTSPAYLHKVVNSNPNHQRNISSKLDGLSMNSKPSNSPLRDDGATSVSCDDLVGNMMFRCVDTEKLFDIWARCIGRCHSKTLRQLLYNHGKLVSICEVEGVLVAYVAFGDGDIKLRAERFLSSITNSMEMVLRRNVEVRIIHLPDGEGEIQFNLPGPKQAESIMASEKERRGGHTNGTEGYSNFPSLLDGNFPSTTNSSDVLAEDNGMRERRQDLPMQRIESIIREQRLETAWLQAVEKGSPGSLNHLRPERNQVLPQEGIYCKDQIESMDSTRFSSQHWEDELNHELKVLKVKNGRVPQKDQGSRRADHCPMSPSLLHDSSLATNSIKDNLGYESSTGPKGCSGLLCWNNSKRKRVKVIGTPVRARKVGRFPLFGECGKSKKKQAGR 1263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00565 1263 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 481 899 - -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 831 860 - -
Bach11g00565 1263 FunFam DNA polymerase III subunit gamma/tau 474 652 - -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 106 137 - -
Bach11g00565 1263 NCBIfam DNA polymerase III subunit gamma/tau 478 827 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Bach11g00565 1263 Gene3D - 470 651 IPR027417 -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 1045 1064 - -
Bach11g00565 1263 CDD HLD_clamp_pol_III_gamma_tau 653 716 IPR045085 -
Bach11g00565 1263 Pfam DNA polymerase III subunits gamma and tau domain III 707 773 IPR022754 GO:0003887
Bach11g00565 1263 FunFam DNA polymerase III subunit gamma/tau 654 716 - -
Bach11g00565 1263 Coils Coil 789 816 - -
Bach11g00565 1263 SUPERFAMILY post-AAA+ oligomerization domain-like 724 825 IPR008921 GO:0003677|GO:0006260
Bach11g00565 1263 SMART AAA_5 510 672 IPR003593 GO:0016887
Bach11g00565 1263 Gene3D - 655 716 - -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 66 91 - -
Bach11g00565 1263 CDD AAA 492 650 - -
Bach11g00565 1263 Pfam DNA polymerase III, delta subunit 493 653 - -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 887 919 - -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 406 426 - -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 66 89 - -
Bach11g00565 1263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 502 700 IPR027417 -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 1172 1195 - -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 25 45 - -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 406 427 - -
Bach11g00565 1263 Gene3D - 717 831 - -
Bach11g00565 1263 MobiDBLite consensus disorder prediction 887 918 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00565 Bach-Chr11 4256493 4261749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00565 474 768 Core DNA Replication Machinery Family AT1G21690 24.671 1.18e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00565 - - qsa:O6P43_012104 1842.4