Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00564 AGAGTCATTTGAATATGTAGAAGGATTAAAAATTAACTCCTGTGAAATAGAATACTTAGGAGTTGAGTGATAAATGATATCCAAAAAGGAGAAAAGAAGGCCATATTCCTTTGGGATCCCAAGAAGAAAAAGGATATTGCTAGATATCCTGAGTATCAGATTCGAAGTTTGTATATGAGGTTGTATTGAAGTGCTTCTAATTTTGTTTCAAACTGTGTTTTACAGGAAAAGGCTTTTTCAGATGATAAATGATCTCCCAACCATATTTGAAGTTGTGACTGGAAGTGCTAAACAACCAAAGGATCAATCAGCTGCTCATAACAACGGTAGCAAAAGCAAAACAAGTGGGAAGGCCCGCCAATCTGATTCTCAGGCTAAGGGAGTGAAGATGTCTCCGCCACCCAAGGAAGAGGATGAGAGTGGAGAAGAAGAAGACGAAGATGACGAACAAGGTGCAACATGCGGGGCCTGTGGCGATAATTATGCCACTGATGAGTTCTGGATCTGTTGTGATGTGTGTGAGAGATGGTTCCATGGAAAATGTGTAAAAATCACTCCTGCTAAGGCTGAGCACATCAAGCAATACAAGTGCCCAAGCTGCAGTAGTAACAAGAGGGCTAGAGTTTAGAGACTCTTAACCCATGGACCAACCACCAATCAAACAAAACAGACAAGGTTTAGGATGTTTGGTGATAAGTTTAAAGTGAATGGAATTGTGACTTGTTTTAGTCAATGAACTTGAATGACTATGCAGACGGAATTTCAAGTTGTTGATGTTCTTTCCTGTTTGGTCTAATCTTGGGAATTATGTTTATAACTAGTCATTGGCAACAAAGATATTAACATAATATGTGTTTA 858 0.3893 MINDLPTIFEVVTGSAKQPKDQSAAHNNGSKSKTSGKARQSDSQAKGVKMSPPPKEEDESGEEEDEDDEQGATCGACGDNYATDEFWICCDVCERWFHGKCVKITPAKAEHIKQYKCPSCSSNKRARV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00564 128 MobiDBLite consensus disorder prediction 57 72 - -
Bach11g00564 128 ProSitePatterns Zinc finger PHD-type signature. 74 120 IPR019786 -
Bach11g00564 128 SMART PHD_3 73 121 IPR001965 -
Bach11g00564 128 Pfam PHD-finger 74 122 IPR019787 -
Bach11g00564 128 SUPERFAMILY FYVE/PHD zinc finger 62 123 IPR011011 -
Bach11g00564 128 ProSiteProfiles Zinc finger PHD-type profile. 71 123 IPR019787 -
Bach11g00564 128 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 122 IPR013083 -
Bach11g00564 128 FunFam PHD finger alfin-like protein 66 122 - -
Bach11g00564 128 CDD PHD_AL_plant 74 123 IPR044104 -
Bach11g00564 128 PANTHER CPG BINDING PROTEIN 1 127 IPR045104 GO:0006355|GO:0042393
Bach11g00564 128 MobiDBLite consensus disorder prediction 13 74 - -
Bach11g00564 128 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00564 Bach-Chr11 4248291 4249258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00564 1 127 Alfin-like Transcription Factor Family AT1G14510 72.441 6.81e-55 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Alfin-like Bach11g00564 PHD 5.2e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00564 K26274 - gmx:100807826 220.705