Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00562 ATGGCAATTGCAGCAAACTCATCATCTTCTACCATGAGCCTAGGCCATGGCCATAGCCAAGACGACACCAAGCCCACCACCACCTCCGCCACCAACAACCATGACAAGCCAGCCGACGATCATAACCACGACATGGTCATGCCGGGTTTCCGCTTCCATCCAACCGAAGAAGAGCTCGTGGAGTTCTACCTTCGCCGTAAGGTGGAGGGAAAGCGCTTCAACGTTGAGCTTATCACTTTCCTTGATCTCTATCGCTATGACCCTTGGGAACTTCCTGCCATGGCTGCAATTGGTGAGAAGGAGTGGTTCTTTTATGTGCCTAGAGATAGGAAGTATCGGAACGGTGATCGTCCAAACCGAGTGACTCCTTCTGGGTACTGGAAAGCGACCGGAGCTGATAGAATGATCAAAACAGAAAATTTCCGGTCGATTGGGTTGAAGAAAACCCTAGTTTTCTATTCTGGAAAAGCTCCGAAAGGCATCCGAACGAGTTGGATTATGAATGAATATCGCTTGCCACACCATGAAACTGAGCGATATCAAAAGGCTGAGATATCGCTTTGCCGCGTCTACAAGAGACCTGGGGTAGAAGACCATCCTTCACTTCCTCGCTGTCTCCCAACCCGACCACCTTGGTCGAGAGCTTCAAATTCTGACAAGAACAAGCACAATGATCTAATGATTCATCAGAACGTAGGATTTGTATCACAATCGCCGCAAATTGATCAAATAGTTGACAAAATAAACGAAGCTGAAGGAAGCAGCACTGCCGGTTCAGATGTCACCACAGCCCTTGGACTCGCCCAGCACAATATTGCTTACCGTACTGCAGTAGGACTACCAGTTCAAATGGAGGATGAAGGATTAATGCTTATGCAGCAACCAAAGCAAGCCCAAGCCACCGCCGCCGCCTCCTCATTAATCCCGCCGGCCACCTTTTTCTGCCCGGCCGACGCAGCTTCTTCGGTGTCATCTACTAATGCTATGGTGGATGATCTCAACAGGATAGTAAGCTATCAACAACTATACTACAATGCTCAAAGTCAGCAGCACCCCAATAACCAGTTGCTCTCTAATTTGCTAATGCAACCACAACCAATGGCTTTCAACTCGCTACCAAACTCGCTCCCAACCACCTTCCCCGACAGACTGTGGGAGTGGAATCCAATCCAAGAGACAAACAGGGAGTACAGCAACATGTCCTTCAAGTAA 1212 0.4876 MAIAANSSSSTMSLGHGHSQDDTKPTTTSATNNHDKPADDHNHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTPSGYWKATGADRMIKTENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPHHETERYQKAEISLCRVYKRPGVEDHPSLPRCLPTRPPWSRASNSDKNKHNDLMIHQNVGFVSQSPQIDQIVDKINEAEGSSTAGSDVTTALGLAQHNIAYRTAVGLPVQMEDEGLMLMQQPKQAQATAAASSLIPPATFFCPADAASSVSSTNAMVDDLNRIVSYQQLYYNAQSQQHPNNQLLSNLLMQPQPMAFNSLPNSLPTTFPDRLWEWNPIQETNREYSNMSFK 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00562 403 Pfam No apical meristem (NAM) protein 48 172 IPR003441 GO:0003677|GO:0006355
Bach11g00562 403 MobiDBLite consensus disorder prediction 1 33 - -
Bach11g00562 403 SUPERFAMILY NAC domain 46 193 IPR036093 GO:0003677|GO:0006355
Bach11g00562 403 Gene3D NAC domain 55 196 IPR036093 GO:0003677|GO:0006355
Bach11g00562 403 ProSiteProfiles NAC domain profile. 46 193 IPR003441 GO:0003677|GO:0006355
Bach11g00562 403 MobiDBLite consensus disorder prediction 1 45 - -
Bach11g00562 403 FunFam NAC domain-containing protein 35 55 196 - -
Bach11g00562 403 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 44 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00562 Bach-Chr11 4232750 4234815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00562 45 209 NAC Transcription Factor Family AT2G02450 92.121 3.52e-114 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bach11g00562 NAM 3.6e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00562 - - gmx:100792622 535.413