Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00559 ATGCGTGAGTCTGGTTCGTTCACAGCTGGTGGTGATGAGCCTGCGTTGATGGCTACGGTTGCTGCTGCTGGAGTTCCTCTAGTCTATGCGTCTGGCATGGCTAGTGCAGGTTCGGTGTGGGGGGCTGTGGTGTTGTTGGAGGATGCGTCTTGGTGGATATTGGATGACCCTGTTTCTTGTGTTCGAAAACAGAGGCTGATGATGGCAAGGAAGATGAGTTATTGTCTTGGTGATGGAGGCCGAGAGGTGTTAGTGTGGGGGATGACTTGTGTGAGAGGGGAAGTGAGAGTTCTTCTGCTGCTTGTTTTCGGCTACTTGTTGGCTACAACAGTAGAAACAGCAAACGAGGATTTTACTGCCCTAGAGGGTTTTATGATAGGCTTACTGAACAAACCTCTCAGCTGGGTGGGTTCTGATCCATGTGATAGATCATGGGTTGGAATTAAGTGCACTGACTCACGTGTTACATCCATAACATTACCAAGCATGAATTTGAGAGGTCAACTTGTTGGAGATATTGGATCTTTATCTGAGTTAGAGACTTTGGATCTGTCTTACAACAAGGGCTTAACAGGACCAATTCCACAAGCAATTGGGAATTTGAAAAAGCTGTCAAGTTTATACCTTGTTGGCTGTGATTTCACTGATAGTATACCAGATGCAATAGGACAACTACAGCAGCTGGTCTACTTATCTCTAAATTCTAATCGCTTTAGTGGACGAATTCCACCTTCTATTGGTAATCTGCCAAATCTTAGTTGGCTAGACTTAACTGACAACCAGCTTGAAGGTCCCATCCCAGTATCTAGTGGCACTACTCCTGGTCTTGATAAGCTATACAAGGCACTGCACTTTCATCTTGGGAAGAATAAGCTTTCAGGCCCAATTCCTCCACAACTTTTTAACTCGAATTTGACACTCATTCATGTGCTACTTGATAACAATCAACTTAGTGGAAGCATTCCTTCAACACTTGGACTTGTTAAGCCTCTGGAGGTGGTGCGTTTTGATGGTAATTCATTAAGTGAATCTGTGCCTCAGAGCCTCAATAATCTTACAGACCTTCAACAACTGATCTTGTCTAACAATAAGCTGTCAAGTCCCTTGCCAAACCTTGGTCGAATGATAACTCTCAATTACCTGGATATGAGCAACAACAGCTTTGATCGGTTGGAATTTCCTTCGTGGTTTTCAGATCTGCATAATCTGTCAACATTAAAGATGGAGAATACTAAACTTGAAGGAGAAATTCCTGCTTCTTTGTTTAGCCTTAAATCTTTGCGGATTGTGATCCTAAACGACAACAAACTTAATGGAACTTTAGATGTTGGCACCACCAGAGGCAATCAACTGCACTTTATTAATTTGCGGGGGAATTCAATTACAGATTTTCAGCAAGAAGATGGAGTCCCTAATGTCAAGATAATACTTTTGGGTAATCCCATTTGCCATGAAAATGGAGTGGCAGCAAAGCCTTTCTGCTCAATTCCACCTCCAACTCAACCCAGTATCTCAGATGCAACACAGCCAAATAACTGTCCTGTTATCTGCGTTTTGTTGGATCAGACTCTTAGTCCCAACTGCAAATGTGCATATCCATATCAAGGAACTTTGTTTTCAAGATTACCTGTGAACTTGGCAAACAACACTTACTATGAAACCCTCAAATATTGTCTTATGAACTCATTTCGTTCTCATCATCTGCCCGTGGATTCAGTTTCTTTCAGCAATCTGACTATGAATCCATTTTCTGATCTATTGAACTTGAGGTTGAAAGTTTTCCCATTAGGCCAGGATCATTTCAATCAAACGGGACTTTCTAGTATAGGCTCTCTGCTAAGCAATCTGAGCTTTGAGCCTGATCCTTACGGACTGTTTCTGTTTGGACCAATTTATTTCATTGGTGAAGGCTATGCACACTATGAAGAACGTACCGAGGGGAGTAAATCGCCAAACCTTGCTGTCATAATAGGAGTAGCAGTTTCGGTTTCTGTCTTGCTAGTTTTAGCACTCCTTGCAGGTGTGTATGCTTTCAAACAAAAGAAAAGGGCAGAGAAAGCAATTGAAAAAACTGATCCTTTCAGACGCTGGGATACAAATGAGAGAAATAGTGAAATCCCTCAGTTGAAAGGAGCAAGACAGTTCTCTTTTCAGGAGCTTCAGAAATACACCGATGATTTTTCTCAGGACAATGAAATTGGTTCCGGGGGTTATGGGAAGGTTTACCGGGGAACTCTTCCGAAGGGACAGCTGATAGCCATAAAACGAGCTCAAAATGTGTCCTTGCAGCGAGGGCTTCAGTTTAAAGCTGAGATTGAACTCCTTTCAAGGGTCCACCACAAGAATCTGGTAAGCCTTTTGGGGTTCTGCTTTGAGGCAGAAGAACAAATGCTGGTTTATGAGTATGTTCCAAATGGAACATTAAAGGACACTCTTACAGGGATATCAGGAATTAGATTGGATTGGAGAGGAAGGTTAAAAGTAGCCCTTGGTGCTGCCAGGGGATTGGCTTATCTTCATGAGCTTGCTGATCCTCCTATTATACATAGGGATATCAAGTCAAACAACATTTTGCTGGATGAGCGCTTCAATGCGAAAGTTGCTGATTTTGGTCTTTCCAAGCCTGTGATTAACTGTGAAAAAGACTATGTTACCACTCAAGTTAAAGGAACAACGGGCTACCTGGATCCTGAGTATTACACATCTGGACAATTGACTAAAAAGAGTGATGTTTATAGTTTTGGAGTGCTCATGTTAGAGTTGATAACTGCAAGAAAGCCAATAGAACGAGGGCAATATGTGGTAAAACTAGTTAGAAAAGCAATTGATAAGACAAAAGAGTTGTATGGACTTCATGAAATTGTTGACCATACAATTGGTTTAGGGTCAACATTAACAGATTTTGAGAAGTTTGTGGATCTTGCAATGAATTGTCTCGAAGAATCAGGTGCTGGCAGGCCTTCAATGAATGATGTGGTAAGAGAAATTGAAAGCATGTTGCTGCAAGCTGGTTCAAACCTCAATGTTGAATCAGTTTCCACTTCAGCTAGTTTTGAGGTGGCACATAGAAGTGCCCACCATCTTGACATCAGTGAATCCTTTGATTCAAGTCCAATATCTTCAAATAAAAAAATATAG 3138 0.4178 MRESGSFTAGGDEPALMATVAAAGVPLVYASGMASAGSVWGAVVLLEDASWWILDDPVSCVRKQRLMMARKMSYCLGDGGREVLVWGMTCVRGEVRVLLLLVFGYLLATTVETANEDFTALEGFMIGLLNKPLSWVGSDPCDRSWVGIKCTDSRVTSITLPSMNLRGQLVGDIGSLSELETLDLSYNKGLTGPIPQAIGNLKKLSSLYLVGCDFTDSIPDAIGQLQQLVYLSLNSNRFSGRIPPSIGNLPNLSWLDLTDNQLEGPIPVSSGTTPGLDKLYKALHFHLGKNKLSGPIPPQLFNSNLTLIHVLLDNNQLSGSIPSTLGLVKPLEVVRFDGNSLSESVPQSLNNLTDLQQLILSNNKLSSPLPNLGRMITLNYLDMSNNSFDRLEFPSWFSDLHNLSTLKMENTKLEGEIPASLFSLKSLRIVILNDNKLNGTLDVGTTRGNQLHFINLRGNSITDFQQEDGVPNVKIILLGNPICHENGVAAKPFCSIPPPTQPSISDATQPNNCPVICVLLDQTLSPNCKCAYPYQGTLFSRLPVNLANNTYYETLKYCLMNSFRSHHLPVDSVSFSNLTMNPFSDLLNLRLKVFPLGQDHFNQTGLSSIGSLLSNLSFEPDPYGLFLFGPIYFIGEGYAHYEERTEGSKSPNLAVIIGVAVSVSVLLVLALLAGVYAFKQKKRAEKAIEKTDPFRRWDTNERNSEIPQLKGARQFSFQELQKYTDDFSQDNEIGSGGYGKVYRGTLPKGQLIAIKRAQNVSLQRGLQFKAEIELLSRVHHKNLVSLLGFCFEAEEQMLVYEYVPNGTLKDTLTGISGIRLDWRGRLKVALGAARGLAYLHELADPPIIHRDIKSNNILLDERFNAKVADFGLSKPVINCEKDYVTTQVKGTTGYLDPEYYTSGQLTKKSDVYSFGVLMLELITARKPIERGQYVVKLVRKAIDKTKELYGLHEIVDHTIGLGSTLTDFEKFVDLAMNCLEESGAGRPSMNDVVREIESMLLQAGSNLNVESVSTSASFEVAHRSAHHLDISESFDSSPISSNKKI 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00559 1045 Gene3D Ribonuclease Inhibitor 127 275 IPR032675 -
Bach11g00559 1045 ProSiteProfiles Protein kinase domain profile. 727 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00559 1045 SUPERFAMILY L domain-like 140 482 - -
Bach11g00559 1045 ProSiteProfiles Leucine-rich repeat profile. 354 376 IPR001611 GO:0005515
Bach11g00559 1045 Gene3D Phosphorylase Kinase; domain 1 697 802 - -
Bach11g00559 1045 SMART serkin_6 727 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00559 1045 Pfam Protein tyrosine and serine/threonine kinase 729 995 IPR001245 GO:0004672|GO:0006468
Bach11g00559 1045 Gene3D Transferase(Phosphotransferase) domain 1 803 1020 - -
Bach11g00559 1045 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 803 1012 - -
Bach11g00559 1045 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Bach11g00559 1045 CDD STKc_IRAK 733 999 - -
Bach11g00559 1045 FunFam Leucine-rich repeat protein kinase family protein 693 802 - -
Bach11g00559 1045 PANTHER RECEPTOR-LIKE PROTEIN 55 133 999 - -
Bach11g00559 1045 SUPERFAMILY Protein kinase-like (PK-like) 713 1024 IPR011009 -
Bach11g00559 1045 Gene3D Ribonuclease Inhibitor 276 474 IPR032675 -
Bach11g00559 1045 FunFam Leucine-rich repeat protein kinase family protein 272 371 - -
Bach11g00559 1045 ProSitePatterns Protein kinases ATP-binding region signature. 733 755 IPR017441 GO:0005524
Bach11g00559 1045 FunFam Leucine-rich repeat family protein 116 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00559 Bach-Chr11 4196677 4202824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00559 92 1037 Receptor kinase-like Gene Family AT5G49760 52.421 0.0 895
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bach11g00559 PK_Tyr_Ser-Thr 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00559 - - gmx:100811702 1115.14