Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00558 ATGATGGATCAAACAGTGAGAGTTCTTCTGCTGCTTGTTTTCGGCTACTTGTTGGCTACAACAGTAGAAACAGCAAACGAGGATTTTACTGCCCTAGAGGGTTTTATGAAAGGCTTACTGAACAAACCTCTCAGCTGGGTGGGTTCTGATCCATGTGATGGATCATGGGTTGGAATTAAGTGCACTGACTCACGTGTTACATCCATAACATTACCAAGCATGAATTTGAGAGGTCACCTTGTTGACGATATTGGATCTTTATCTGAGTTAGAGAATTTGGATCTGTCTTACAACAAGGGCTTAACAGGACCAATTCCACAAGCAATTGGGAATTTGAAAATGCTGTCAAGCTTATACCTTGTTGGCTGTGATTTCACTGATAGTATACCAGATGCCATAGGACAACTAGAGCAGTTGGTCTACTTATCTCTAAATTCTAATCGCTTTAGTGGACGAATTCCACCTTCTATTGGTAATCTGCCAAATCTCAGTTGGCTAGACTTAACTGACAACCAGCTTGAAGGTCCCATCCCAGTATCTAGTGGTACTACTCCTGGTCTTGATAAGCTATACAAGGCACTGCACTTTCATCTTGGGAATAATAAGCTTTCAGGCCCAATTCCTCCTCAACTTTTTAACTCGAATTTGAAACTCATTCATGTGCTACTTGATAACAATCAACTTACAGGAAGCATTCCTTCAACACTTGGACTTGTTGAGGCTCTGGAGGTGGTGCGTTTTGATGGTAATTCATTAAGTGAATCTGTGCCTCAGAGCCTCAATAATCTTACAGACCTTCAACAGCTGGATATGAGCAACAACAGCTTTGATCGGTTGGAATTTCCTTCGTGGTTTTCAGATCTGCATAATCTGTCAACGTTAAAGATGGAGAATACTAAACTTGAAGGAGAAATTCCTGCTTCTTTGTTTAGCCTTAAATCTTTGGGGATTATGATCCTAAAAGACAACAAACTTAATGGAACTTTAGATGTTGGCACCACCAGAGGCAATCAACTGCACTTTATTAATTTGCAGGGGAATTCAATTACAGATTTTCTGCAACAAGATGGAGTCCCTAATGTCAATATAACACTTTTGGATAATCCCATTTGCCAAGAAACTGGAATGGCAGCAAAGCCTTTCTGCTCACTTCCACCTCCAACTCAACCCAGTATCTCAGATGCAACACAGCCAAATAACTGTCCTGTTATCTGTGTTTTGTTGGATCAGATTCTTAGTCCCAACTGCAAATGTGCATATCCATATCAAGGAACTTTGTTTTCAAGATTACCTGTGAACTCGGCAAACCACACTTACTATGAAACCCTCAAAAATTCTCTTAAGTACTCATTTCAATCTCATCATCTGCCCGTGGATTCAGTTTCATTCAGCAATCTGACTAATAATCCATTTGATCTATTGAACTTGAGGTTGAACGTTTTCCCATTAGGCTCGGATCATTTCAATCAAACAGGACTTTCTAATATAGGCTCTCTGCTAAGCAATCTGAGCTTTCAGAGTGATCCTTCTGGACTGTTTCTGTTTGGACCAATTTATTTTATTGGTGAAGGCTATGCACACTATGAAGAACATACCGAGGGGAGTAAACCGCCAAACCTCGCTGTCATAATAGGAGTAGCAGTTTCTGGTTCTGTCTTGCTAGTGTTAGCACTCCTTGCAGGAGTGTATGCTTTCAAACAAAAGAAAAGAGCAGAGAAAGCAATTGAAAAAACTGATCCTTTCAGACGCTGGGATACAAATGAGGGAAGTGGCGAAACCCCTCAGTTGAAAGGAGCAAAACAGTTCTCTTTTCAAGAGCTTCAGAAATGCACCAATGATTTTTCTCAAGACAATGAAATTGGTTCCGGGGGTTATAGGAAGGTTTACCGGGGAACTCTTCCGAATGGACAGCTGATAGCCATAAAACGAGCTCAAAAAGTGTCCTTGCAGCGAGGGCTTCAGTTTAAAGCTGAGATTGAACTCCTTTCAAGGGTCCACCACAAGAATCTGGTAAGCCTTTTGGGGTTCTGCTTTGAGGCAGAAGAACAAATGCTGGTTTATGAGTATGTTCCAAATGGAACATTAAAGGACACTTTTACAGGGAAATCAGGAATTAGATTGAATTGGAGAGGAAGGTTAAAAGTAGCCCTTGGTGTTGCCAGGGGATTGGCTTATCTTCATGAGCTTGCTGATCCTCCTATCATACATAGGGACATCAAGTCAAACAACATTTTGCTGGATGAGCGCTTCAATGCGAAAGTTGCTGATTTTGGTCTTTCCAAGCCTATGATTAACTATGAAAAAGACTATGTTACCACTCAAGTTAAAGGAACAACGGGCTACTTGGATCCTGAGTATTACACATCTGGACAGTTGACTAAAAAGAGTGATGTTTATAGTTTTGGTGTGCTCATGTTAGAGCTGATAACTGCAAGAAAGCCAATAGAAAGAGGCCAATATGTGGTAAACCTAGTTAGAAAAGCAATTGATAAGACAAAAGGGTTGTATGGACTTCATGAACTTGTTGACCATACAATTGGTTTAGGGTCAACATTAACAGACTTTGAGACGTTTGTGGATCTTGCAATGAAGTGTCTTGAAGAATCAGGTGCTAGCAGGCCTTCAATGAATGATGTGGTAAGAGAAATTGAAAGCATGTTGCTGCAAGCTGTTTCAAACCTCAATGTTGAATCAGTTTCCACTTCAGCTAGTTTTGAGGTGGCATATAGAAGTCCCCACCATCTTGACATCAGTGAATCGTTTGATTCAAGTCCAATATCTTCAAATAAAAAAATATAG 2799 0.4044 MMDQTVRVLLLLVFGYLLATTVETANEDFTALEGFMKGLLNKPLSWVGSDPCDGSWVGIKCTDSRVTSITLPSMNLRGHLVDDIGSLSELENLDLSYNKGLTGPIPQAIGNLKMLSSLYLVGCDFTDSIPDAIGQLEQLVYLSLNSNRFSGRIPPSIGNLPNLSWLDLTDNQLEGPIPVSSGTTPGLDKLYKALHFHLGNNKLSGPIPPQLFNSNLKLIHVLLDNNQLTGSIPSTLGLVEALEVVRFDGNSLSESVPQSLNNLTDLQQLDMSNNSFDRLEFPSWFSDLHNLSTLKMENTKLEGEIPASLFSLKSLGIMILKDNKLNGTLDVGTTRGNQLHFINLQGNSITDFLQQDGVPNVNITLLDNPICQETGMAAKPFCSLPPPTQPSISDATQPNNCPVICVLLDQILSPNCKCAYPYQGTLFSRLPVNSANHTYYETLKNSLKYSFQSHHLPVDSVSFSNLTNNPFDLLNLRLNVFPLGSDHFNQTGLSNIGSLLSNLSFQSDPSGLFLFGPIYFIGEGYAHYEEHTEGSKPPNLAVIIGVAVSGSVLLVLALLAGVYAFKQKKRAEKAIEKTDPFRRWDTNEGSGETPQLKGAKQFSFQELQKCTNDFSQDNEIGSGGYRKVYRGTLPNGQLIAIKRAQKVSLQRGLQFKAEIELLSRVHHKNLVSLLGFCFEAEEQMLVYEYVPNGTLKDTFTGKSGIRLNWRGRLKVALGVARGLAYLHELADPPIIHRDIKSNNILLDERFNAKVADFGLSKPMINYEKDYVTTQVKGTTGYLDPEYYTSGQLTKKSDVYSFGVLMLELITARKPIERGQYVVNLVRKAIDKTKGLYGLHELVDHTIGLGSTLTDFETFVDLAMKCLEESGASRPSMNDVVREIESMLLQAVSNLNVESVSTSASFEVAYRSPHHLDISESFDSSPISSNKKI 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00558 932 FunFam Leucine-rich repeat protein kinase family protein 183 283 - -
Bach11g00558 932 Gene3D Ribonuclease Inhibitor 27 182 IPR032675 -
Bach11g00558 932 CDD STKc_IRAK 620 886 - -
Bach11g00558 932 Gene3D Ribonuclease Inhibitor 183 368 IPR032675 -
Bach11g00558 932 SUPERFAMILY L domain-like 35 277 - -
Bach11g00558 932 PANTHER RECEPTOR-LIKE PROTEIN 55 42 886 - -
Bach11g00558 932 FunFam Leucine-rich repeat protein kinase family protein 580 689 - -
Bach11g00558 932 Gene3D Transferase(Phosphotransferase) domain 1 690 906 - -
Bach11g00558 932 ProSiteProfiles Protein kinase domain profile. 614 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00558 932 SMART serkin_6 614 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00558 932 Pfam Protein kinase domain 615 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach11g00558 932 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 690 899 - -
Bach11g00558 932 SUPERFAMILY L domain-like 192 472 - -
Bach11g00558 932 SUPERFAMILY Protein kinase-like (PK-like) 600 915 IPR011009 -
Bach11g00558 932 FunFam Leucine-rich repeat family protein 27 182 - -
Bach11g00558 932 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Bach11g00558 932 Gene3D Phosphorylase Kinase; domain 1 585 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00558 Bach-Chr11 4186772 4191937 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00558 8 924 Receptor kinase-like Gene Family AT5G49760 50.899 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Bach11g00558 PK_Tyr_Ser-Thr 8.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00558 - - gmx:100811702 1054.28