Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00544 GAAATTTTGTTTGTGTCGGATTTCGTAGATCTGGATAAATGACAAATGTATCAGAGTGTTTCTAGTTCAATTCTCGTTGGCAGCAACTCGTTAGTTCATGGTCAGCATTTAGATTGTGGTGGCAGCACAATGGATCCTGCCAATGGAGGTAACAATCTTAACAGCCCTAATCTCTCCTCAAAGCAACGGCTACGCTGGACACATGAGCTTCATGAACGCTTTGTTGATGCTGTGGCACAACTTGGTGGGCCTGATCGTGCCACACCTAAAGGTGTCCTTAGAGTTATGGGTGTACAAGGCTTAACAATATACCATGTCAAAAGCCATTTACAGAAATACCGACTTGCAAAATACCTCCCTGAATCATTGTCTGATGGGAAAAAAGTCGATAAGAAGGAAACAGGGGATATGCTTTCCAATCTAGATGGTTCATCTGGAATGCAAATTACTGAAGCGTTAAAGCTGCAAATGGAGGTACAGAAGCGATTACATGAGCAATTAGAGGTGCAGAGACAGCTACAATTAAGAATAGAAGCCCAGGGTAAATACTTGAAGAAGATAATTGAAGAGCAACAACGGCTCAGTGGGGTTCTCTCAGAAGCACCTGATTCTGGGGTTGCAGCCACAGTTCCAGGTGATATGTCCCAAGAACCGGACAATAAGACTGACCCGGCAACCCCTGCCCCAATCTCTGAGTCTCCCCTTCAGGAAAAAGCTGCAAAAGAACGTGCCTCGGCAAAGAGTCTTTCGATTGATGAATCTTTTTCTTCTCACCATGAACCGTTGACACCGGATTCTGCTTGCCATGACGTTTCCCCTACTGATACTGACAGCCCTAAAGCTGAGAGATCAACAAAGAAGCAAAGGGGGAGCGCAGAGGGAGCATATTCAAAACCAGATATGGTGCTTCCTCATCAGATACTGGAGTCAAGCATCTCTTCATACCAACAAACAAGCAATGTTTTCCTTACCCGAGAGCAGATTGATCCATCGTTAGGTATGACTACCAGAAGTAATGATGAGTTGGAAAAAGGTGGCAGCAACCTGTGA 1050 0.4476 MYQSVSSSILVGSNSLVHGQHLDCGGSTMDPANGGNNLNSPNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPESLSDGKKVDKKETGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPDSGVAATVPGDMSQEPDNKTDPATPAPISESPLQEKAAKERASAKSLSIDESFSSHHEPLTPDSACHDVSPTDTDSPKAERSTKKQRGSAEGAYSKPDMVLPHQILESSISSYQQTSNVFLTREQIDPSLGMTTRSNDELEKGGSNL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00544 334 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 44 328 IPR044848 GO:0003700
Bach11g00544 334 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Bach11g00544 334 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Bach11g00544 334 MobiDBLite consensus disorder prediction 181 286 - -
Bach11g00544 334 FunFam Myb family transcription factor 45 103 - -
Bach11g00544 334 MobiDBLite consensus disorder prediction 311 334 - -
Bach11g00544 334 Gene3D - 45 104 - -
Bach11g00544 334 Pfam MYB-CC type transfactor, LHEQLE motif 132 178 IPR025756 -
Bach11g00544 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Bach11g00544 334 MobiDBLite consensus disorder prediction 200 214 - -
Bach11g00544 334 Coils Coil 135 155 - -
Bach11g00544 334 MobiDBLite consensus disorder prediction 260 274 - -
Bach11g00544 334 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00544 Bach-Chr11 4070975 4075433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00544 81 307 G2-like Transcription Factor Family AT2G01060 67.982 3.32e-94 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bach11g00544 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00544 - - tcc:18597377 472.241