Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00523 ATGTCTTCCTCAAAGCTTTCATCCACTGCCCTTTTCCTCTCCCTTAACCTCCTCTTCTTCACGATGGTGAGCTCTCAACAATCGCCATCGCCATCGCCATCGCCATCGCCCGCTTGTTCCATTGACATTCTTACTCTGAGTGTGTGTTCCAATGTGTTGTGTTTGTTCATTATTGGGATACCACCATACCCGTGCTGCACCCTCATTCAGGGTTTGGTAGACCTTGAAGCTTCTGTGTGCCTTTGCGCTGCACTCAAAGCTAATATCTTGGGCGTCATTACTGTTGACCTTGATCTTGCCCTGAGATTAATATTCAACAGCTCCTCATTGGATGGTGACTACGATTCATCTGGAGGTACTAAAGAACTTGGCCGTGGAAAGAGAGGGAAAAAGCTTGAAGATTTTGTAGAAAATTTAGTTATGAAAGTGATGGAGAAGCAAGAGCAGATGCATAAGCAATTAGTGGATATTATAGAAAAGAAGGAAAAGGAAAGAGTAATGAGAGAAGAAGCTTGGAAGCAGAAGGAGATGGAAAGAATCCAGAGGGATGAGGAGGCCAGAGCCCAAGAAAAATCTTGTAATTTAGCCTTGATATCGTTTATTCAGAATTTACTAGGGAATGAGATTCAAATCCCCCAACCAGTAAGCATCTTCAGAGAAGAAGATGTAGCTGAGGAAAACATCCAGAAAGATTTTAAGACTGATCCAAGTAGTAACAGATGGCCAAAAGCTGAAGAGCAAGCCCTCATGACTCTAAGAACTTCCTTAGAAAGCAAGTTTCGTCTTATGGGATTTAAGGGTTCTATATGGGAGGAGATATCTGAAGCAATGAGTAATATGGGCTACAACCGTTCTGCAATGAAGTGTAAGGAGAAATGGGAAAAAACATCAATAAGTACTACAAAAGGACAATGGGAAGCGAGAAGAAGCGGCGTCTTAATGGTAAAGCCTGCCCTTTCTTTTACGAGTTGGACATTTTGTACAGGAATGGTCTCTTGA 999 0.4244 MSSSKLSSTALFLSLNLLFFTMVSSQQSPSPSPSPSPACSIDILTLSVCSNVLCLFIIGIPPYPCCTLIQGLVDLEASVCLCAALKANILGVITVDLDLALRLIFNSSSLDGDYDSSGGTKELGRGKRGKKLEDFVENLVMKVMEKQEQMHKQLVDIIEKKEKERVMREEAWKQKEMERIQRDEEARAQEKSCNLALISFIQNLLGNEIQIPQPVSIFREEDVAEENIQKDFKTDPSSNRWPKAEEQALMTLRTSLESKFRLMGFKGSIWEEISEAMSNMGYNRSAMKCKEKWEKTSISTTKGQWEARRSGVLMVKPALSFTSWTFCTGMVS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00523 332 Gene3D - 241 298 - -
Bach11g00523 332 CDD GT1 239 295 - -
Bach11g00523 332 CDD HPS_like 39 107 IPR027923 -
Bach11g00523 332 Pfam Myb/SANT-like DNA-binding domain 239 295 IPR044822 -
Bach11g00523 332 Coils Coil 144 164 - -
Bach11g00523 332 FunFam Trihelix transcription factor GT-2 241 302 - -
Bach11g00523 332 Gene3D - 38 113 IPR036312 -
Bach11g00523 332 PANTHER FI21293P1 113 296 - -
Bach11g00523 332 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 42 102 IPR036312 -
Bach11g00523 332 ProSiteProfiles Myb-like domain profile. 233 297 IPR001005 -
Bach11g00523 332 Pfam Hydrophobic seed protein 39 106 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00523 Bach-Chr11 3823677 3827491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00523 126 294 Trihelix Transcription Factor Family AT5G47660 44.737 1.96e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bach11g00523 Hydrophob_seed 1.3e-13 CL0482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00523 - - ccaj:109790864 238.424