Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00519 GTTCGCTTGCTTTTTGCCTTTTTCCCCTTCTTATGTGTCTATTCCCTTTTCTTCTCTCCCCTTTGGAGCAGTAGTAACGATGGGGAATGTGAATGCTAGAGAAGATGAGAATGGTAATCCATCAGGGGCTGAAGAAAGTGGTGGCAGTTTGCAGGAGAACATGTCTGCAGCAGATGGGACTGGGAATGCTGGATATCGTGCGCATGGTGTGGCTTCTGAGCTGATGGGTCAGTCTCCTCCGACAAGCCCTAGAGCTACCCAATCTCCATTGATGTTCGCTCCTCAAGTCCCAGTGATTCCACTTCAAAGACCAGATGAGATGCATGTTCCAAGTAATTCCTGGATGCAAACTACTTCAGGACATGAAGATATGTGCAGTGAACAAGGAATTCCAACTATGATTACTTGGAATTATGATGGGAAAGAAGTAGCTGTTGAGGGATCATGGGATAATTGGAAAACAAGAATGCCCTTGCAGAGGTCAGGGAAAGACTTTACAATAATGAAGGTACTGCCATCTGGTGTTTACCAGTACAGATTTCTTGTTGATGGACACTGGAGGTACGCTTCTGACTTGCCTTGGGCCCAAGATGATACTGGCAATACTTACAACATTTTGGACTTGCAGGATTATGTTCCTGAAGATATTGGAAGTATTTCTAGCTTTGAACCTCCACAGTCGCCAGAATCTAGCTATAACAACTTGCAACTTGGCTCTGAAGATTACTCAAAGGAGCCACCTCTGTGTCCGCCACACTTGCAGAAGACATTGCTCAATTTGCCTGCAACAAATATGGAAATCCCACCTCCTTTATCAAGACCTCAACATGTAGTGCTCAATCATCTTTACATGCAGAAAGGAAAGGGCTGTCCTTCAGTGGTTGCACTCGGTACAACCCATCGGGTTTCGTCCAAATATGTCACTGTGGTGCTTTACAAGTCTTTGCAGAGGTAA 955 0.4503 MGNVNAREDENGNPSGAEESGGSLQENMSAADGTGNAGYRAHGVASELMGQSPPTSPRATQSPLMFAPQVPVIPLQRPDEMHVPSNSWMQTTSGHEDMCSEQGIPTMITWNYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQYRFLVDGHWRYASDLPWAQDDTGNTYNILDLQDYVPEDIGSISSFEPPQSPESSYNNLQLGSEDYSKEPPLCPPHLQKTLLNLPATNMEIPPPLSRPQHVVLNHLYMQKGKGCPSVVALGTTHRVSSKYVTVVLYKSLQR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00519 291 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 218 287 IPR006828 GO:0005515
Bach11g00519 291 SUPERFAMILY E set domains 102 183 IPR014756 -
Bach11g00519 291 MobiDBLite consensus disorder prediction 1 32 - -
Bach11g00519 291 SUPERFAMILY AMPKBI-like 186 288 IPR037256 -
Bach11g00519 291 MobiDBLite consensus disorder prediction 1 39 - -
Bach11g00519 291 CDD E_set_AMPKbeta_like_N 105 181 - -
Bach11g00519 291 Gene3D - 192 289 - -
Bach11g00519 291 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 291 IPR043554 -
Bach11g00519 291 Pfam Glycogen recognition site of AMP-activated protein kinase 104 183 IPR032640 -
Bach11g00519 291 Gene3D Immunoglobulins 97 186 IPR013783 -
Bach11g00519 291 SMART AMPKBI_2 199 289 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00519 Bach-Chr11 3771574 3773943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00519 103 184 Protein tyrosine phosphatase (PTP) family AT3G01510 34.091 2.26e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00519 K07199 - qsa:O6P43_031379 503.827