Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00497 CAAATTCAGAGGCTTCTATTGTAACCTTATCAATCTCTGTGGTTGAAAGCTTGGAGATTTGCTTCGCTTTCTAAAAATGGTTTCTCTGGGGGATTCTCACTCCAATTCCAATCGTTTCCCTTTAACTCGAAGCTATTACACCACCACTTCTGCAAATTCTTCCTCCAAAATTCACCGAAACATCGGCAGGTCCATGCGAACCATTCGCTCCCATTTATTTCAAGATGACCATAGCTGCTCCTTCACTGCATCCGCCACTGAAAAATCTGCATGTGTTTCCGAGAACTTGACCGATTCGGTCGTCGACATGAGGCTCGGTGAACTCGCATCGAAGAACAGCAAAACTTCCAAGTCGTCTTCTACGGAGGAGGAGTTGCTTGATCTTTCTCAGGCTTTCAGTGACTTCTCGGCTTGTAGCAGCGATATATCCGGGGAGTTGCAGAGGCTGGCGACTTTACCTTCATCGGAAAATGTGCTGAAGAGCGAGGGTGGTGAAGCTGAGCCGGAGCCGGAGCCTTGCATGGGCTTCCTGCAAAGGGAGAATTTTTCTACTGAGATTATTGAGAGTATTTCGCCGGAGGATCTTCAGCCGACAGTGAAGATCTGTATCGATGGCCTGCAGTCACCGTCGGTGGCTGTGAAGCGATCCGCTGCGGCCAAGCTCAGGCTATTGGCGAAGAACCGGGCGGACAATCGAGCTCTGATTGGTGAATCGGGTGCTGTCCCTGCTTTGGTTCCCCTGCTTCGTTGCAGTGATCCATGGACCCAGGAGCACGCCGTCACGGCCTTGCTGAATCTGTCCCTTCACGCAGACAACAAGACGTTGATAACAAATGCAGGAGCTATAAAGTCACTGATTTATGTACTGAAAACTGGGACAGAGACTTCAAAGCAGAACGCAGCGTGTGCGCTGTTAAGCCTTGCGTTGGTAGAAGAGAACAAGAGTTCAATTGGGGCTTGCGGGGCAATTCCACCTCTTGTTTCTTTGCTACTGAATGGTTCTAACAGGGGAAAGAAGGATGCACTGACGACACTGTACAAACTGTGTTCCATAAAGCCAAACAAGGAGAGGGCCGTTAGTGCTGGAGCAGTGAAGCCCCTTGTGGAGCTGGTGGCCGAGCAAGCGACAGGTATGGCTGAAAAGGCAATGGTTGTGCTTAACAGCTTAGCTGGGATTCAGGAAGGGAAGGATGCAATTGTGGAAGAAGGTGGAATAGCCGCTCTTGTGGAAGCAATTGAAGATGGGTCAGCGAAGGGGAAGGAATTTGCTGTTTTGACGCTTCTGCAGCTATGTTCTGACAACGTGAGGAATAGAGGGTTGCTTGTGAGGGAGGGAGGAATACCTCCTTTGGTTGCTCTTTCCCAGACTGGGAGTGTCAAAGCTAAGCACAAGGCTGAAACGCTTCTTGGATATTTGAGAGAATCAAGACAAGAAGCATCCTCTTCAAGCCCTTAAGGGAGTAACTATTACGTAGGAAGGTAATTGTAGAATGTAATTGGTTGTTGTATATATAGTGTTTTTGATGGTTGTACAGTGTGGCCTTAGGTAATTGCAAGGATGTTTTTAAGTTAGACGATGCGAGCAAGCAATAGACTGACACTGATGTATGGATTTAGCTAGGTTTTGGGAAAGCAAGAGGGGTTTGCTTTCCCTTTATATTCAATTTGTTTTCTTTCCAAGAGATACTTGGTTGTCTTTGCGTTTTGGTTGATGAGGTTGGGATAGCTTTCTCATGCCTCGCTTTGATGACCCTAGTTTTGTGGAAAAGGGTTACTGATTGTATTGTTCTTTTTTAAGTAGTGAAGGTACAGGGTTTGTACTATTGGGATCATATTAGTGTCCATAATTCGAATGGAGCTTTGATTACATAAATGAAGTTAAGTGCTACTGA 1892 0.4667 MVSLGDSHSNSNRFPLTRSYYTTTSANSSSKIHRNIGRSMRTIRSHLFQDDHSCSFTASATEKSACVSENLTDSVVDMRLGELASKNSKTSKSSSTEEELLDLSQAFSDFSACSSDISGELQRLATLPSSENVLKSEGGEAEPEPEPCMGFLQRENFSTEIIESISPEDLQPTVKICIDGLQSPSVAVKRSAAAKLRLLAKNRADNRALIGESGAVPALVPLLRCSDPWTQEHAVTALLNLSLHADNKTLITNAGAIKSLIYVLKTGTETSKQNAACALLSLALVEENKSSIGACGAIPPLVSLLLNGSNRGKKDALTTLYKLCSIKPNKERAVSAGAVKPLVELVAEQATGMAEKAMVVLNSLAGIQEGKDAIVEEGGIAALVEAIEDGSAKGKEFAVLTLLQLCSDNVRNRGLLVREGGIPPLVALSQTGSVKAKHKAETLLGYLRESRQEASSSSP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00497 459 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 214 256 IPR000225 GO:0005515
Bach11g00497 459 Pfam Armadillo/beta-catenin-like repeat 205 242 IPR000225 GO:0005515
Bach11g00497 459 Pfam Armadillo/beta-catenin-like repeat 287 325 IPR000225 GO:0005515
Bach11g00497 459 SUPERFAMILY ARM repeat 171 448 IPR016024 -
Bach11g00497 459 Gene3D - 158 317 IPR011989 -
Bach11g00497 459 FunFam U-box domain-containing protein 4 160 312 - -
Bach11g00497 459 PANTHER U BOX DOMAIN-CONTAINING 160 447 - -
Bach11g00497 459 FunFam U-box domain-containing protein 4 313 454 - -
Bach11g00497 459 Gene3D - 318 458 IPR011989 -
Bach11g00497 459 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 337 379 IPR000225 GO:0005515
Bach11g00497 459 SMART arm_5 203 243 IPR000225 GO:0005515
Bach11g00497 459 SMART arm_5 244 284 IPR000225 GO:0005515
Bach11g00497 459 SMART arm_5 409 449 IPR000225 GO:0005515
Bach11g00497 459 SMART arm_5 367 407 IPR000225 GO:0005515
Bach11g00497 459 SMART arm_5 326 366 IPR000225 GO:0005515
Bach11g00497 459 SMART arm_5 285 325 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00497 Bach-Chr11 3542305 3544713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00497 151 452 U-box Gene Family AT2G23140 48.065 1.96e-82 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00497 - - zju:107434861 724.546