Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00491 ATGTCTATGAGTGACTACCCGGCCGTCGATTGCGTTCACCAGCGCGGCGGGGGTGGCTACGGTACTGTTACTACCGATCACCATCGTCTCTCCTCCAAACGTAAGTTTGATGATTATGTTTACATTTTTGACGATGAGGATGATGAGGACTTGGATGTCTCAGAGTTAGTTTCAGTGAGGATGAGAAAAGAAGAACCCAAGGCCGTCAATTCTAACTCACACACCGTCAATCGTTCTGTGTCAGGTATCAATACAACTGTCTTTGATGCACAATCAGCTCTGTGTGCTTGCTCTTTGCTGTCCGAGTCGACTCGGTCGTCCTCCAGGTTACAGTTTTTTGTTAGAATGATGTCAGAGGGAAATACTATGGTAATGCAAGCTTGTCCACAGGATACCGTGAAATCGATTCACGAGCGTATACAAACAATGAAAGGCATCCCTGTGTTTGAGCAGAGGCTCATATACAAGGGTAAGCAGCTTCAATGGGAGCAGTCTCTAGCTGAGTGTGACATTCAGAATGATGCAAATGTCCAATTGGTTGGTCGGATGCGAAGCACCGAGCATCCTCAAGCTTGGCAAGTGATAAACGATATGGTATCACTCATTTGCCGCATGTGCAGAGGGGGAGTGGAACATGATGCCTTGAAAACTCTCAAGGGACTCATAACTAGCTACCTGAGCATGACTCACAGACTTGACAATGAGTCTGCTTATGGGTATTTCCAGATTTTCTTGTCTTCCTCTGCTCCGAAAGTGCTGATCATGCTCTACATGTCACCGTATAGAGGTAATAAAGACTGTGCTGATGGTTCAATTAGGCATTTTTTGAGTTCTTGTCGCACTACCTTGTCTAAATCGTTATATAATCAATGTGCCCGTGTAGTGTTGGAATTCTGCAAATTGCTTAGAAAAGTGGATTGTGAGGATCCTTTGTATCTCTTTTGTCGGAGTACATTTGGGTCTTTATTGGAGACTGTTGGTGCTTCCTATGGTTCTGAGGGGGGTAAAGAGTTGATTCTCATTCAAGAGATTTCCCCATTTATTCGTGAGCTTGCAAATAGATTGTTGAAGGATTTGGATTGCAGTATGGAATCCCCATGTAGTGTGGTGCCATTGTCGACTGACGTTCATGATTTCACAGCGTTCATACTCCCTTTAAGGACTAGAATCACGGAGCAACACTCTTGCCAAGGTTCTTCCTTACCTGATGAACCTCATCATAAGCATCTCATACCTGTAGAAGAGATTGAATACCTTCATCTTATATTTATCGAGTTGTTGAAGAAAATGGATCGGTGTCTGCAAAAAATGGAGGAAATATTGGCTGCCAACGATAGACGGGAAGTGGATACACATTATTATGCCTGGTCTCAGTTTCTTTCCATCTTGAAAGAATTGTATCACATTTCTAAGCTCTATGAAGGTGCTGAAGAAGAATTTTGGTCAGTTTTGAGGCGTCAAAAAAATATGATTTGTGTACTAATTATTCGATATGCCAAGAGAACTGATGATCATCAGTGGATTCTTGAGCACAAGAGTGTTACGAATTTTGAATCTAGGAGGCACTTGGGAATGATGATGTTCCCTGAGCTAAAAGAAGACTATGAGGAGCTGCATGAGATGCTTATTGACAGGTCTCAGTTGTTGGCAGAATCATTTGAGTACATAGCACGAGCAGAACCTGAATCTCTTCATGCAGGTCTTTTTATGGAATTCAAAAGTGAGGAAGCTACAGGTCCAGGAGTGCTGCGGGAGTGGTTTCTCTTGGTATGTCAAGCAATATTTAATCCCCAAAACGCTCTTTTTGTGGCATGCCCAAATGATCGTAGAAGATTTTTCCCCAATCCTGCATCTAAGGTAGATCCTTTGCACCTTGAATACTTCAATTTCTCTGGTCGAGTTATTGCATTAGCCTTGATGCATAGGGTGCAAGTAGGTATTGTTTTTGATCGTGTGTTTTTCATGCAATTGGCTGGAAACCATATTACTTTAGAAGATATACGGGATGCTGATCCTTTCTTGTATAGTAGCTGCAAGCAGATATTGGAAATGGATGCTGATTTCATTGACTCAGATGCTTTAGGACTGACATTTGTTAGAGAGGTGGAGGAGTTAGGACACAAGAAAATTGTTGAGCTTTGCCCCGATGGAAAAACCATTGTTGTTAATAGTAAGAACAGGAAGAAGTATGTTGAGCTTCTTATACAAGATCATTTTGTGTCATCTATCTCAGCGCAGGTGTCACATTTTGCCCAAGGTTTTGGTGATATTCTAAGCAACTCAAGGCTGCAACAGTTATTTTTTAAAAGTTTAGAGCTTGAAGATCTTGATTGGATGATGCATGGGAATGAGAATATCATTTCCGTTGAAGATTGGAAGGCACATACCGAGTATAATGGCTATAAAAAGACTGATCCACAGATATCTTGGTTTTGGGAGATTGTTGGGAGAATGTCAGCTGAAGAAAGAAAGATTCTTCTGTTTTTCTGGACATCGGTGAAGTATTTACCAGTTGAAGGTTTTCGTGGTTTGGCTTCCCATCTCTGTATTGACAAGTCCCCTGAACCTGACAATCGCCTTCCTTCATCTCACACATGCTTTTACCGGATCTGTTTCCCACCCTATTCTTCTTTGGCTGTTATGGAGGATCGTCTTAGAATCATCACCCAGGAACACATTGGCTACAGCTTTGGTACTTGGTGA 2703 0.421 MSMSDYPAVDCVHQRGGGGYGTVTTDHHRLSSKRKFDDYVYIFDDEDDEDLDVSELVSVRMRKEEPKAVNSNSHTVNRSVSGINTTVFDAQSALCACSLLSESTRSSSRLQFFVRMMSEGNTMVMQACPQDTVKSIHERIQTMKGIPVFEQRLIYKGKQLQWEQSLAECDIQNDANVQLVGRMRSTEHPQAWQVINDMVSLICRMCRGGVEHDALKTLKGLITSYLSMTHRLDNESAYGYFQIFLSSSAPKVLIMLYMSPYRGNKDCADGSIRHFLSSCRTTLSKSLYNQCARVVLEFCKLLRKVDCEDPLYLFCRSTFGSLLETVGASYGSEGGKELILIQEISPFIRELANRLLKDLDCSMESPCSVVPLSTDVHDFTAFILPLRTRITEQHSCQGSSLPDEPHHKHLIPVEEIEYLHLIFIELLKKMDRCLQKMEEILAANDRREVDTHYYAWSQFLSILKELYHISKLYEGAEEEFWSVLRRQKNMICVLIIRYAKRTDDHQWILEHKSVTNFESRRHLGMMMFPELKEDYEELHEMLIDRSQLLAESFEYIARAEPESLHAGLFMEFKSEEATGPGVLREWFLLVCQAIFNPQNALFVACPNDRRRFFPNPASKVDPLHLEYFNFSGRVIALALMHRVQVGIVFDRVFFMQLAGNHITLEDIRDADPFLYSSCKQILEMDADFIDSDALGLTFVREVEELGHKKIVELCPDGKTIVVNSKNRKKYVELLIQDHFVSSISAQVSHFAQGFGDILSNSRLQQLFFKSLELEDLDWMMHGNENIISVEDWKAHTEYNGYKKTDPQISWFWEIVGRMSAEERKILLFFWTSVKYLPVEGFRGLASHLCIDKSPEPDNRLPSSHTCFYRICFPPYSSLAVMEDRLRIITQEHIGYSFGTW 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00491 900 CDD HECTc 539 896 IPR000569 GO:0004842
Bach11g00491 900 FunFam E3 ubiquitin-protein ligase UPL5 784 899 - -
Bach11g00491 900 SMART hect_3 558 898 IPR000569 GO:0004842
Bach11g00491 900 Gene3D Hect, E3 ligase catalytic domain 784 898 - -
Bach11g00491 900 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 111 898 - -
Bach11g00491 900 Pfam HECT-domain (ubiquitin-transferase) 589 896 IPR000569 GO:0004842
Bach11g00491 900 SMART ubq_7 110 182 IPR000626 GO:0005515
Bach11g00491 900 FunFam E3 ubiquitin-protein ligase UPL5 isoform A 103 198 - -
Bach11g00491 900 SUPERFAMILY Hect, E3 ligase catalytic domain 537 887 IPR035983 GO:0004842
Bach11g00491 900 SUPERFAMILY Ubiquitin-like 111 198 IPR029071 -
Bach11g00491 900 FunFam E3 ubiquitin-protein ligase UPL5 isoform A 660 742 - -
Bach11g00491 900 Gene3D Hect, E3 ligase catalytic domain 660 742 - -
Bach11g00491 900 PRINTS Ubiquitin signature 121 141 IPR019956 -
Bach11g00491 900 PRINTS Ubiquitin signature 163 184 IPR019956 -
Bach11g00491 900 PRINTS Ubiquitin signature 142 162 IPR019956 -
Bach11g00491 900 ProSiteProfiles Ubiquitin domain profile. 110 186 IPR000626 GO:0005515
Bach11g00491 900 ProSiteProfiles HECT domain profile. 560 898 IPR000569 GO:0004842
Bach11g00491 900 Gene3D Hect, E3 ligase catalytic domains 540 774 - -
Bach11g00491 900 Pfam Ubiquitin family 113 184 IPR000626 GO:0005515
Bach11g00491 900 Gene3D - 103 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00491 Bach-Chr11 3504001 3507618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00491 110 206 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 32.000 2.61e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00491 - - gmx:100789233 1296.18