LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach11g00440	GTTCTTTCTCTCTGCCTTCTTCTTCTTCTTCTCGCTCTCTGATTTATGGACAAGGGATGGCTTCTCACACCGGATAATTCTTCTGCTAATTCTCTCGGTTTCTTTCCATCCAAACAGCCCACTAACACTGCCAATACCCTCACCATAGCCAAGCTCAAGCAGGAAACCATGTTTCCAGCTCCAGGATTAGGCTTCCCAGTCAATTTAACTCGCCGTGAAGACCACTTACCGTCTGATGATAATCATGTGGTCGACTTTTTCTCTGACAGAAACAAGTCTTCATCAACTCCATCTGATCATGTTGAAAATCATCGCCGTGTTAAAACCGCCATTACTGGTATCTCCATCAAGAAGGAAAATTCTCACCCCGAACCTCCTCACAACTCTAATTTGGGAGTAAATACGGGTTTACAACTCCTTACGGCTAACACCAGGAGTGATCAATCAACAGTGGATGATGGAATTTCATCAGATGCTGAAGATAAGCGAGCCAAGAATTCTGAGCTGGCGGAACTGCAAGACGAGCTTCAACGGATGAACTCAGAAAACCAAAATCTGAAGGAGATGCTAAGCCAGGTGAGCAGTAACTACACCGCCTTGCAAATGCATCTGGTCTCATTAATGCAACAGAATCAGCGTACCGGGAGCAAGGAACATGAGGTTGTTGATGGAAAAAGTGAGCAGAAAAATCATGGGGTGGTGCCAAGGCAGTTTCTCGATTTAAGATCTAGTGGTATTACAGCAGAAGTAGATGATCAAGTATCGAATTCCTTATCAGATGAAAGAACTCTATCTAGTACACCTGATCAGAACAACCACAATAATGGCAAAAATGAAATTACAAGGGAAGAGAGTCCAAACTCTGAAACACAAGTTTGGGGTCCTAGTAAGGTTCAGAAATTGAATCCTCCAACCCACATGGATCAGTCCAGCACTGAAGCCACCATGAGGAAAGCTCGTGTCTCCGTTCGAGCTCGATCAGAAGCTCCCATGATCAGTGATGGATGCCAATGGCGAAAATATGGACAAAAAATGGCAAAGGGAAATCCGTGTCCTCGTGCATATTATAGATGCACCATGGCAGTTGGTTGCCCCGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAGAACAATTTTAATTACAACTTATGAAGGAGCGCATAATCATCCATTGCCACCTGCTGCAATGGCCATGGCAAATACTACAACAGCTGCGGCTACCATGTTGCTGTCTGGGTCTATGTCTAGTGCTGATGGGATAATGAACCCCAACTTGCTTACAAGAGCTATTCTTCCTTGTTCCACAAGCATGGCAACACTTTCAGCTTCAGCGCCATTCCCCACTGTCACATTGGACCTCACACACAACCCAAACTCGAACCCATTGCAGTTTCAAAGACCTCAAACCCCATTTCAGGTCCCCTTTGGCTCAGGACCAACCCCTGCGACAGCTCAACTCCCTCAGGTATTTGCTCAAGCACTTTATAATCAATCCAAATTCTCCGGGCTTCAGTTATCCCAAGATTTGGCTTCTTCCCAATTACCCAACCAAGCTCCAAGGCCACCGTTGCAGCCAAACCAGCATCAGCCCTCGCTGGCTGACACCGTCAGTGCCGCCACCGCAGCCATCACCGCTGACCCTAACTTCACTGCTGTACTTGCCGCTGCCATCTCCTCCATCATCGGTGGTGCTCATCCGAACACCAACAACAACAACAACAACGGTAACAATAATAGCAGCAGCAATCCCAACATTATCAGCAGCGCTACAGGGATTTAA	1782	0.4658	MDKGWLLTPDNSSANSLGFFPSKQPTNTANTLTIAKLKQETMFPAPGLGFPVNLTRREDHLPSDDNHVVDFFSDRNKSSSTPSDHVENHRRVKTAITGISIKKENSHPEPPHNSNLGVNTGLQLLTANTRSDQSTVDDGISSDAEDKRAKNSELAELQDELQRMNSENQNLKEMLSQVSSNYTALQMHLVSLMQQNQRTGSKEHEVVDGKSEQKNHGVVPRQFLDLRSSGITAEVDDQVSNSLSDERTLSSTPDQNNHNNGKNEITREESPNSETQVWGPSKVQKLNPPTHMDQSSTEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDRTILITTYEGAHNHPLPPAAMAMANTTTAAATMLLSGSMSSADGIMNPNLLTRAILPCSTSMATLSASAPFPTVTLDLTHNPNSNPLQFQRPQTPFQVPFGSGPTPATAQLPQVFAQALYNQSKFSGLQLSQDLASSQLPNQAPRPPLQPNQHQPSLADTVSAATAAITADPNFTAVLAAAISSIIGGAHPNTNNNNNNGNNNSSSNPNIISSATGI	578

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach11g00440	578	MobiDBLite	consensus disorder prediction	196	221	-	-
	Bach11g00440	578	PANTHER	WRKY TRANSCRIPTION FACTOR 36-RELATED	120	563	IPR044810	GO:0003700
	Bach11g00440	578	Coils	Coil	144	181	-	-
	Bach11g00440	578	MobiDBLite	consensus disorder prediction	201	215	-	-
	Bach11g00440	578	FunFam	probable WRKY transcription factor 31	302	379	-	-
	Bach11g00440	578	Gene3D	WRKY domain	302	379	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bach11g00440	578	MobiDBLite	consensus disorder prediction	128	151	-	-
	Bach11g00440	578	Pfam	WRKY DNA -binding domain	319	376	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bach11g00440	578	MobiDBLite	consensus disorder prediction	235	302	-	-
	Bach11g00440	578	ProSiteProfiles	WRKY domain profile.	312	378	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bach11g00440	578	MobiDBLite	consensus disorder prediction	235	260	-	-
	Bach11g00440	578	SMART	WRKY_cls	317	377	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bach11g00440	578	MobiDBLite	consensus disorder prediction	499	521	-	-
	Bach11g00440	578	MobiDBLite	consensus disorder prediction	270	302	-	-
	Bach11g00440	578	SUPERFAMILY	WRKY DNA-binding domain	310	378	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bach11g00440	578	MobiDBLite	consensus disorder prediction	554	578	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach11g00440	Bach-Chr11	3058109	3060449	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach11g00440	1	563	WRKY Transcription Factor Family	AT1G62300	51.325	7.69e-159	464

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bach11g00440		WRKY	6.9e-24	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach11g00440	-		-	ccaj:109803638	684.1