Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00431 ATGGCAAAAGGCAAAGTGAGATTGACCAGCAGTGGCCCTTATGTTATACTAGACATTGGATTGGTAAAGCTGACGATATTGAAACCTCAAGGATATCTGAGTGGGATTGCTTATGGAGGCACCTTCTTGATCCCAAGTCAAGTGAATCCTGTAGAGGGTATTGGGACATCAACTGGAGTTTACCTGGAGGCCAGGATAGATATGAACAACTCGAAGGGGCTATACAGTGTAATTCACCAGAGTAATGACCTTACAGAGATTTCATTCAAAAATACCTATGACCCCTCTACTCCTGGGGTCAAGTTGCCACTTAGTATTGACATTAGGTACATATTGAGGAGTGGTGTTTCTGGGTTCTACTACTATGCAATATATGAGCGTTTGCCTGGATGTCAAGCCTTTGACCTTGCTCAAACAAGGACAGCATTCAAACTGCGGAGGGAGAAGTTTCATTACATGGCAATATCTGATGAGAAGCAAAGAATAATGCCAATGCCAGAAGATCTACTTCCAGGTAGATGCCAACAGTTGATTGTACCTGAATCAGTTTTGCTGATAAATCCTATTAATCCTGATAAAGGCGAGATGTTTCATACGATACAATACATTGGGGATGATACATTAGCCAAATTTGAAGAGGGAGAGACATGGAGGAAAGTCTTTGGCCCCTTCTTTGCTTACCTCAATTCCACCTCAGACGTGTCAGATGCACACAACTTGTGGTTGGATGCAAAAAAGCAGGATTATCAGTTCTGGGTTCAAACAGATTCAAATGGAAATTTCAGCATCAAGAATGTTATCCCTGGAGTTTATGCACTTCATGGGTGCGTACCTGGCTTCATTGGTGATTACATGCATAACTCAGTCTTTACCATCTCAGCAGGTTCAGAGACAGAACTAGGCAATTTGATATTTGTTCCCCAAAGAGATGGTCCTACTTTGTGGGAAATCGGCTTCCCTGATCGTTCAGCTATTGATTTCTTTGTTCCCGATGTCAACATGAAGAGAGGAACGGATGGCAAGTATCAGCCATCAACATGGAAAGTAAATTTTAATCTCAGAGCAGTAACCACTGGAACATACAAGCTTAGGTTGGCCATTGCTTCAGCAACACGTACAGATCTCGAGCTCCATGTCAATTACTTGGATACAAAGCACCAGGTATTCCAAGTAACGAACTTGGGGACAGAGAACACAATCTGTCGACATAGAATACATGGACCCTACCGGCTCTTCAGCATTGACATTCCCTCTTCATTGCTGGTAGAGGGTGACAATTCAGTACTTCTTACACAGGCTAGAGGGGGAGATTCGCTTTGTGGGATTCTCTATGACTATATAAGATTGGAAGCTCCCGAAACTAAAGATTTAGGATTGAATGATGGAATAATCAGATAA 1398 0.4242 MAKGKVRLTSSGPYVILDIGLVKLTILKPQGYLSGIAYGGTFLIPSQVNPVEGIGTSTGVYLEARIDMNNSKGLYSVIHQSNDLTEISFKNTYDPSTPGVKLPLSIDIRYILRSGVSGFYYYAIYERLPGCQAFDLAQTRTAFKLRREKFHYMAISDEKQRIMPMPEDLLPGRCQQLIVPESVLLINPINPDKGEMFHTIQYIGDDTLAKFEEGETWRKVFGPFFAYLNSTSDVSDAHNLWLDAKKQDYQFWVQTDSNGNFSIKNVIPGVYALHGCVPGFIGDYMHNSVFTISAGSETELGNLIFVPQRDGPTLWEIGFPDRSAIDFFVPDVNMKRGTDGKYQPSTWKVNFNLRAVTTGTYKLRLAIASATRTDLELHVNYLDTKHQVFQVTNLGTENTICRHRIHGPYRLFSIDIPSSLLVEGDNSVLLTQARGGDSLCGILYDYIRLEAPETKDLGLNDGIIR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00431 465 CDD RGL4_M 248 303 IPR029413 -
Bach11g00431 465 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 195 247 - -
Bach11g00431 465 CDD RGL4_C 315 450 - -
Bach11g00431 465 SUPERFAMILY Galactose-binding domain-like 310 450 IPR008979 -
Bach11g00431 465 Pfam Polysaccharide lyase family 4, domain II 241 300 IPR029413 -
Bach11g00431 465 Gene3D - 340 450 - -
Bach11g00431 465 Pfam Polysaccharide lyase family 4, domain III 340 449 IPR029411 -
Bach11g00431 465 Gene3D - 228 301 - -
Bach11g00431 465 Pfam Rhamnogalacturonate lyase family 14 192 IPR010325 -
Bach11g00431 465 SUPERFAMILY Starch-binding domain-like 247 301 IPR013784 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00431 Bach-Chr11 3006481 3010572 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00431 1 452 Polysaccharide Lyase AT1G09890 33.229 6.86e-94 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00431 K18195 - egr:104442924 504.212