Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00409 ATGATGCAGCCAGGACCTGGTATGGCTCCACCAACCATGGGCCAGCAACCGAACCAACAATACCCACAGCAGCAACCGTACATGATGATGCCGCCGCAGGCCCAGGCGCCGCCGATATGGGCTCCATCGGCTCAGCCACCGCCTCAGCCGATTGCTCAACCGCAGCCGGCTCAACCGGCCCAACCGACTAGCGCCGATGAGGTTCGCACCCTCTGGATCGGCGATTTGCAGTACTGGATGGACGAGAACTATCTTTATACTTGTTTTGCGCACACCGGCGAGGTTTCCTCAGTGAAAGTAATACGGAATAAGCAAACTAATCAACCCGAAGGTTATGGGTTTATCGAGTTTTATACTCGTGCAGCTGCTGACCGAATACTTCAGACATATAATGGTACTATCATGCCAAATGGTGGACAGAGCTTCAGACTGAACTGGGCAACTTTTAGTTCTGGTGAGAGGCGTCATGACGATACTCCAGACTACACGATATTTGTTGGGGACTTGGCTGCAGATGTTACTGATTACATGCTACAGGAGACATTTAGGAGCCGGTATTCGTCAATTAAGGGTGCAAAAGTTGTAATCGATAGGCTCACTGGGCGGACGAAAGGATATGGCTTTGTTAGATTTGCAAATGAGAGTGAGCAATTGCAAGCTATGAATGAGATGCAAGGAGTTCTTTGTTCAACAAGACCCATGCGCATTGGACCAGCCACTAATAGAAGCCCCGGCAATCAGCAAAAAGCTTCGTATCAGAATCCTCAAGGGGGACAGAACGAGAATGATCCAAATAACACAACTATATTTGTTGGTAATTTGGATCCAAATGTCACTGATGATCATCTAAGGCAAGTTTTTGGTCAGTATGGAGAGTTAGTACATGTTAAGATTCCAGCTGGGAAGCGATGTGGGTTTGTTCAATTTGCTGACAGGAGCTGTGCGGAAGAGGCGCTGCGGCTGTTGAATGGGACAGTGTTGGGTGGACAAAATGTTCGGCTATCATGGGGTCGTAGCCCTTCGAACAAACAGGCTCAGCCAGATCCAAACCAGTGGAATGGTGGTGGATATTACGGATATGCTCAGGGGTATGAAAATTATGGATATGCCCCTAATGCTGCAGGAGCTGCAGCTCAGGATCCCAACATGTATGGAGGCTATCCTGGGTACTCGAATTACCAACCGCCTCAGCAACAGCAACAGCAACAAATGGGATATAGTTAA 1224 0.4869 MMQPGPGMAPPTMGQQPNQQYPQQQPYMMMPPQAQAPPIWAPSAQPPPQPIAQPQPAQPAQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTNQPEGYGFIEFYTRAAADRILQTYNGTIMPNGGQSFRLNWATFSSGERRHDDTPDYTIFVGDLAADVTDYMLQETFRSRYSSIKGAKVVIDRLTGRTKGYGFVRFANESEQLQAMNEMQGVLCSTRPMRIGPATNRSPGNQQKASYQNPQGGQNENDPNNTTIFVGNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQFADRSCAEEALRLLNGTVLGGQNVRLSWGRSPSNKQAQPDPNQWNGGGYYGYAQGYENYGYAPNAAGAAAQDPNMYGGYPGYSNYQPPQQQQQQQMGYS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00409 407 MobiDBLite consensus disorder prediction 236 268 - -
Bach11g00409 407 MobiDBLite consensus disorder prediction 391 407 - -
Bach11g00409 407 SUPERFAMILY RNA-binding domain, RBD 253 363 IPR035979 GO:0003676
Bach11g00409 407 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 60 343 - -
Bach11g00409 407 MobiDBLite consensus disorder prediction 12 30 - -
Bach11g00409 407 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 162 241 IPR000504 GO:0003723
Bach11g00409 407 SUPERFAMILY RNA-binding domain, RBD 48 148 IPR035979 GO:0003676
Bach11g00409 407 SMART rrm1_1 268 335 IPR000504 GO:0003723
Bach11g00409 407 SMART rrm1_1 70 145 IPR000504 GO:0003723
Bach11g00409 407 SMART rrm1_1 163 237 IPR000504 GO:0003723
Bach11g00409 407 MobiDBLite consensus disorder prediction 1 66 - -
Bach11g00409 407 MobiDBLite consensus disorder prediction 385 407 - -
Bach11g00409 407 FunFam Polyadenylate-binding protein RBP45C 154 245 - -
Bach11g00409 407 Gene3D - 9 152 IPR012677 -
Bach11g00409 407 Gene3D - 251 375 IPR012677 -
Bach11g00409 407 SUPERFAMILY RNA-binding domain, RBD 154 259 IPR035979 GO:0003676
Bach11g00409 407 FunFam Polyadenylate-binding protein RBP45 10 153 - -
Bach11g00409 407 MobiDBLite consensus disorder prediction 31 57 - -
Bach11g00409 407 FunFam Polyadenylate-binding protein RBP45C 246 371 - -
Bach11g00409 407 CDD RRM1_SECp43_like 70 150 - -
Bach11g00409 407 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 267 339 IPR000504 GO:0003723
Bach11g00409 407 CDD RRM2_SECp43_like 161 240 - -
Bach11g00409 407 Gene3D - 153 250 IPR012677 -
Bach11g00409 407 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 69 149 IPR000504 GO:0003723
Bach11g00409 407 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 269 332 IPR000504 GO:0003723
Bach11g00409 407 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 71 136 IPR000504 GO:0003723
Bach11g00409 407 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 164 227 IPR000504 GO:0003723
Bach11g00409 407 MobiDBLite consensus disorder prediction 233 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00409 Bach-Chr11 2844957 2848464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00409 71 346 Eukaryotic Initiation Factors Gene Family AT4G34110 25.442 3.65e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00409 - - aprc:113864230 590.882