Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00397 CCTAGCCCTCACTTGTTCTCTGCGTGGAGTCTGATTGTTATGGACTCACAGAAGTTGTTGCTTTCCCGAGAAAACCCTAGGCCTCTGGGGTTTCCCACTGAGCGACTGGTCTCTTCTGCGAACACAAAATCCATGCCCGTTGAGATCGGGCAGAAGCCTCCTCCTTCGGTACTCGACCGGTTCAAGGCCTTGCTCAAGGAACGGGATGATGAACTGAGGGCTTCTTCTTCTGATGGCGTGCCACCGCCCAGTACCGAAGAAATCGTCCAACTTTACGACCAAGTATTGTCAGAGCTCACCTTCAATTCGAAGCCCATCATTACGGATCTTACCATCATTGCTGGAGAGCAGAAGGTGCACGGCAAGGGCATTGCTGATGCAATTTGCAACCGGATTCTCGAGGTCTCTGCTGAGCAAAAGCTTCCTTCACTCTATCTTTTGGACAGTATTGTGAAGAATATTGGTCGGGATTATGTTAGATACTTCTCTACACGTCTACCTGAAGTTTTTTGTGAGGCCTACAGGCAGGTTCAGCCTAATTTACATAATTCTATGCGTCACCTTTTTGGCACCTGGTCAACAGTGTTTCCAGCTTTTGCCCTGCGCAAGATTGAAGTTCAGCTGCAATTTTCTCAAGCAGCTAATCGGCAACCATCAAACACTAATCCCGTTAGGGTGTCTGAATCTTCTCGGCCAACTCATGGCATACATGTTAATCCAAAATACTTGCGGCAGTTGGACAACTCATCTGTGGACAACGTAACAGGTGAAAGGTTGGATTCTACAGGAAGCACAGTTCAAACCAGTTTTGGGCTTGGAGCTAGTAAGATACATCCATCTTTAACCAGTAGGCTTGGAAGAGCCTCTTCCCCTTTATCAGCGTCTATAGATGATTATGCAGTTGAGAATTCTACTGGCAAGGCAGTTGACAGAGAGTCCCCTTCTCATCCCGCATTTGATTACGGACTAGGCAAAACTATAGGTAGAGATGAGGAGTTGAGTGAATGGCAGCGTAAACCCTATTCTGGTGATGGTCGCAGCCGATTTCAAATTCCTAAAACATACAACCTTAATAATGGGCTTCAACGTCAAAGTCCAAGAGCTCTGATTGATGCATATGGCAGTGACAAAAGGGCAGAAACTTCAAGCAATAAGCCTTTGTTGGTTGAAAAGCTGGATGTAAATAGCACAGACAAGGTGGTATCAACATCATGGCAGAATAGTGAAGAGGAGGAATTTGATTGGGAAGATATGAGCCCAACATTAGTAGATCGAAATAGAAATAATGGTTTTCTGCCCTCAGCTATTGGTCTTTCTAGAGAAAGGCCTGGTTATATTGCAGCTAATGCAGCTTCTTTGGATCAAGATACCAGGAGCAGTTGGTCAAGACTGTCTCAACTTCCTCTAGTTGAAGATTCTTCTGTCATACCAGATGATGTGATTGCCTCTTCAAGTTATGGTCGTGGATCACGGGGTCAGGTATCTGGATTTCAAACTCAGATGAATCAGAATCCGGGCCCCCGTCATCCTCATGATGCATGGAATATTTTGCATCAGTCTTCTAATTCTTCACAACGCCTTTTTAATGGTAGAGGGCGAGCAAGGAATATTCAGATGTCTCCTATTGATAACATTCCTAATGTTGAGGTAAAACCATATGGGATTCGACCTACTGTATCTAGAATGGGCACAACTGGTCTTGAGTCAAATGTGGAGGTTCGCCCGCCAATCTTGCCCTCACCGTTTGTGATGAGGCCTCCAATAAATGTGCACATGACTCGTCAACCCACCATAAATCCAAATTTTCCTTTCCAAAAACATATTAGGAGTCAGTTTGGGACAATAAATGCTAGTAACACTATTCTGAATCAAGGTCCAAATAAATCCTTGCTTGTGCCTGAACAGCAGTTGGATAACATTGAGAACGATCCAAGTAAACCAAAGCTAGCGCAGTTGCCTAATCCACTAGCTGGGCTGATTTCATTAAACCAGCAAAACCGCAGACTAGTCACTACTTCGCAAGGGGATAGTGCTGTTATAAGTACAGCTGTGTCAAATACATTACCTGTTGTACAATTCCCTTTACCAGTCCCAAATATTGCAGATAACTCATTTCATTTACGGGGGGCAGCCTTGCCTCTACCTCCAGGTCTCCCTCCTGCTCCATCACAAATGATTCCTCATCCAAATCCTAGCCCATTTGTATCAAGCCAGCAGCCAGCTGGTGCATTTTCTGGTTTGATTGATTCTCTGATGGCTCAAGGTCTGATCTCATTGACCAAACAATCTTCTGTACAGGATTCTGTTGGGACTGAGTTTAATCCTGATGTCCTGAAAGTTCGTCATGAGTCAGCCATTAGTGCCTTGTATACTGATCTTCCTAGACAGTGCACAACCTGTGGCCTCCGATTTAAGTGCCAAGAGGACCACAGTAGTCATATGGATTGGCATGTGACAAAGAACAGAATGTCTAAAAGTCGTAAGCAGAAACCTTCTCGCAAGTGGTTTGTCAGTCAGAGGATGTGGCTTAGTGGTGCAGAGGCATTGGGGACCGAGGCTGCTCCTGGTTTTCTTCCAACTGAGACCATAGAGGAAAAGAAAGATGATGAAGAGTTGGCTGTGCCAGCTGACGAGGATCAGACAACATGTGCATTATGTGGAGAGCCATTTGATGAATTTTACAGTGATGAAACGGAAGAATGGATGTATAAAGGAGCTGTATACTTCAACGCACCCATGGGAGCAGCAGCAGGCATGGATAGGTCTCAGTTAGGTCCCATTATTCATGCCAAATGTAGATCAGAGTCTAATATGGCCCCCCCTGAAGATTTTGAACAGGATGAAGGGGGCACCAATGATGAGGGTAGCCAAAGAAAACGACAGCGGAGTTAA 2892 0.4516 MDSQKLLLSRENPRPLGFPTERLVSSANTKSMPVEIGQKPPPSVLDRFKALLKERDDELRASSSDGVPPPSTEEIVQLYDQVLSELTFNSKPIITDLTIIAGEQKVHGKGIADAICNRILEVSAEQKLPSLYLLDSIVKNIGRDYVRYFSTRLPEVFCEAYRQVQPNLHNSMRHLFGTWSTVFPAFALRKIEVQLQFSQAANRQPSNTNPVRVSESSRPTHGIHVNPKYLRQLDNSSVDNVTGERLDSTGSTVQTSFGLGASKIHPSLTSRLGRASSPLSASIDDYAVENSTGKAVDRESPSHPAFDYGLGKTIGRDEELSEWQRKPYSGDGRSRFQIPKTYNLNNGLQRQSPRALIDAYGSDKRAETSSNKPLLVEKLDVNSTDKVVSTSWQNSEEEEFDWEDMSPTLVDRNRNNGFLPSAIGLSRERPGYIAANAASLDQDTRSSWSRLSQLPLVEDSSVIPDDVIASSSYGRGSRGQVSGFQTQMNQNPGPRHPHDAWNILHQSSNSSQRLFNGRGRARNIQMSPIDNIPNVEVKPYGIRPTVSRMGTTGLESNVEVRPPILPSPFVMRPPINVHMTRQPTINPNFPFQKHIRSQFGTINASNTILNQGPNKSLLVPEQQLDNIENDPSKPKLAQLPNPLAGLISLNQQNRRLVTTSQGDSAVISTAVSNTLPVVQFPLPVPNIADNSFHLRGAALPLPPGLPPAPSQMIPHPNPSPFVSSQQPAGAFSGLIDSLMAQGLISLTKQSSVQDSVGTEFNPDVLKVRHESAISALYTDLPRQCTTCGLRFKCQEDHSSHMDWHVTKNRMSKSRKQKPSRKWFVSQRMWLSGAEALGTEAAPGFLPTETIEEKKDDEELAVPADEDQTTCALCGEPFDEFYSDETEEWMYKGAVYFNAPMGAAAGMDRSQLGPIIHAKCRSESNMAPPEDFEQDEGGTNDEGSQRKRQRS 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00397 950 FunFam polyadenylation and cleavage factor homolog 4 68 196 - -
Bach11g00397 950 MobiDBLite consensus disorder prediction 917 950 - -
Bach11g00397 950 SUPERFAMILY ENTH/VHS domain 70 196 IPR008942 -
Bach11g00397 950 MobiDBLite consensus disorder prediction 473 493 - -
Bach11g00397 950 MobiDBLite consensus disorder prediction 201 224 - -
Bach11g00397 950 Pfam CID domain 80 180 IPR006569 -
Bach11g00397 950 ProSiteProfiles CID domain profile. 71 199 IPR006569 -
Bach11g00397 950 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 60 938 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Bach11g00397 950 ProSitePatterns Zinc finger C2H2 type domain signature. 784 804 IPR013087 -
Bach11g00397 950 MobiDBLite consensus disorder prediction 471 496 - -
Bach11g00397 950 CDD CID_Pcf11 76 196 IPR047415 -
Bach11g00397 950 Gene3D - 68 196 IPR008942 -
Bach11g00397 950 MobiDBLite consensus disorder prediction 1 43 - -
Bach11g00397 950 MobiDBLite consensus disorder prediction 292 311 - -
Bach11g00397 950 MobiDBLite consensus disorder prediction 201 221 - -
Bach11g00397 950 SMART 558neu5 74 196 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00397 Bach-Chr11 2757506 2763617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00397 722 950 C2H2 Transcription Factor Family AT4G04885 72.489 8.18e-109 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00397 K14400 - gmx:100794796 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00397 11 2757506 2763617 Bach11g00397 11 2757506 2763617 ECH