Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00395 ATGTTTCAGCCAAACATATTTGAGACTATGCTGGATATGTCCCACAGGACTTCTCCTGAGAGTGATTTAGGAAGGACCAAGGATGATGACTATGAGAGCAAATCAGGCACTGAGACCATGGATGCTCCTTCCGGTGACGACCAAGATCCCAACCAAAGACCCAAAAAGAAGCGCTACCACCGCCATACCCTGCGCCAAATACAAGAGATGGAAGCCTTCTTCAAGGAGTGTCCTCATCCAGACGACAAGCAAAGGAAAGAACTTAGCCGCGAGCTGGGGTTAGAGCCTTTACAAGTCAAGTTTTGGTTCCAAAACAAGCGCACCCAGATAAAGGCCCAACATGAACGCCATGAGAACTCTATTCTCAAGGCTGAGAATGAAAAGCTTCGCATTGAGAACAACAGGTACAAGGAAGCCCTAAGTAATACCAGCTGCCCCAACTGCGGAGGTCCTGCTGCTCTTGGTGAAATGTCCTTTGACGAGCATCACTTGAGGATTGAGAATGCTCGTTTAAGAGAAGAGATTGATAGGATGTCAGGGATTGCGGCGAAATATGTTGGAAAACCTGTGACTTGCTTCTCAAACCTTTCACCTCGTATGTCTTCTGGCTCTCTTGATCTTGGGGTTGGTAATTATGGAGCACAATCAGGCATGGTAGGTGAAATTTATGGTGCTAGCAGTGATCTTCTTAGGTCACTTCCAATTCCTAATGAAGCAGACAAACCCATGATTGTGGAGCTTGCTGTTGCTGCAATGGAGGAGCTAATGAGACTAGCTCAAGCTGGTGAGCCTTTATGGATCCCAAATGACCACTCTACTGAGATTCTAAATGAAGAAGAATACTTGAGGACATTCCCTAGAGGAATTGGTCCCAAACCCTTGGGGCTAAAATCTGAAGCCTCAAGAGAAACAGCGGTGGTCATTATGAATCATATTAGCCTCATCGAGATTCTCATGGATGTGAATCAATGGTCAACTGTGTTTTGTGGCATTGTTTCGAGAGCATTGACACTAGAAGTCCTCTCAACTGGAGTGGCAGGAAATTATAACGGGGCCTTGCAAGTGATGTCAGCTGAGTTCCAGGTGCCTTCTCCTCTTGTTCCTACTCGTGAGAACTATTTTGTGAGGTACTGTAAGGAACACCCAGATGGGACATGGGCGGTGGTTGATGTTTCCTTGGATAACCTGCGTCCAAGTCCAACATCAAGAAGCAGAAGAAGGCCTTCTGGCTGTATAATTCAAGAATTGCCAAATGGTTACTCAAAGGTTACATGGATTGAGCATGTGGAAGTGGATATTGATAGAGCTATGCAGAACATGTATAGACCTCTTGTTAATTCTGGCCTTGCCTTTGGAGCAAAACGGTGGGTGGCTACATTAGAGAGACAATGTGAACGTCTTGCTAGCTCCATGGCCAGCAACATACCTGCAGGAGACCTTTGCGTGATAACCAGTACAGATGGTAGGAAAAGTATGCTGAGGCTGACAGAAAGAATGGTGATGAGCTTTTTTACTAGTGTTGGTGCTTCAACGGCACATGCTTGGGCAACGCTACCAGCAACAGAGTCTGATGATGTAAGGGTCATGACCAGGAAGAATATGGATGATCCAGGAAGGCCACCTGGTATAGTGCTCTGTGCTTCTACTTCCTTCTGGATTCCGGTTCCTCCAAATAGGGTATTCGATTTCCTTCGAGATGAAAACTGTAGAAATGAGTGGGATATTCTCTCTAATGGTGGTCTTGTTCAAGAAATGGCACACATAGCAAATGGTAGGGATCCAGGCAACTGTGTCTCGTTACTTCGTGTGAATAGTGTGAATTCCAGTCAAAGTAACATGCTGATACTTCAAGAGAGTAGCACTGACTCTACAGGCTCATATGTAATATATGCTCCAGTTGATATTGCTGCGATGAATGTTGTCTTAGGCGGCGGGGACCCAGATTATGTTGCTCTCCTTCCCTCAGGTTTTGCTATTCTCCCTGATGGGCCTGCAGGACAAAAAGGAGGACATATTCTTGATGTTGGATCTGGAGGTTCTCTACTGACAGTTGCATTTCAGATCTTAGTTGACTCAGTGCCAACGGCAAAACTTTCTCTAGGTTCAGTGGCCACTGTTAACAATCTAATCAAGTGCACAGTTGAAAGGATCAAAGCTGCAGTGATGTATGACAGTACAGCACATAATTGA 2190 0.4548 MFQPNIFETMLDMSHRTSPESDLGRTKDDDYESKSGTETMDAPSGDDQDPNQRPKKKRYHRHTLRQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQIKAQHERHENSILKAENEKLRIENNRYKEALSNTSCPNCGGPAALGEMSFDEHHLRIENARLREEIDRMSGIAAKYVGKPVTCFSNLSPRMSSGSLDLGVGNYGAQSGMVGEIYGASSDLLRSLPIPNEADKPMIVELAVAAMEELMRLAQAGEPLWIPNDHSTEILNEEEYLRTFPRGIGPKPLGLKSEASRETAVVIMNHISLIEILMDVNQWSTVFCGIVSRALTLEVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRENYFVRYCKEHPDGTWAVVDVSLDNLRPSPTSRSRRRPSGCIIQELPNGYSKVTWIEHVEVDIDRAMQNMYRPLVNSGLAFGAKRWVATLERQCERLASSMASNIPAGDLCVITSTDGRKSMLRLTERMVMSFFTSVGASTAHAWATLPATESDDVRVMTRKNMDDPGRPPGIVLCASTSFWIPVPPNRVFDFLRDENCRNEWDILSNGGLVQEMAHIANGRDPGNCVSLLRVNSVNSSQSNMLILQESSTDSTGSYVIYAPVDIAAMNVVLGGGDPDYVALLPSGFAILPDGPAGQKGGHILDVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIKCTVERIKAAVMYDSTAHN 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00395 729 Gene3D - 313 471 IPR023393 -
Bach11g00395 729 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Bach11g00395 729 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 52 721 IPR042160 -
Bach11g00395 729 SMART START_1 246 466 IPR002913 GO:0008289
Bach11g00395 729 SUPERFAMILY Homeodomain-like 40 113 IPR009057 -
Bach11g00395 729 ProSiteProfiles START domain profile. 237 469 IPR002913 GO:0008289
Bach11g00395 729 CDD homeodomain 56 114 IPR001356 GO:0003677
Bach11g00395 729 FunFam Homeobox-leucine zipper protein GLABRA 2 246 465 - -
Bach11g00395 729 Pfam Homeodomain 56 111 IPR001356 GO:0003677
Bach11g00395 729 Coils Coil 107 142 - -
Bach11g00395 729 MobiDBLite consensus disorder prediction 18 36 - -
Bach11g00395 729 SUPERFAMILY Bet v1-like 509 718 - -
Bach11g00395 729 Gene3D - 43 129 - -
Bach11g00395 729 MobiDBLite consensus disorder prediction 1 16 - -
Bach11g00395 729 FunFam Homeobox-leucine zipper protein HDG1 44 129 - -
Bach11g00395 729 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Bach11g00395 729 CDD START_ArGLABRA2_like 241 465 - -
Bach11g00395 729 MobiDBLite consensus disorder prediction 1 60 - -
Bach11g00395 729 Pfam START domain 247 466 IPR002913 GO:0008289
Bach11g00395 729 SMART HOX_1 54 117 IPR001356 GO:0003677
Bach11g00395 729 SUPERFAMILY Bet v1-like 238 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00395 Bach-Chr11 2745724 2749242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00395 1 724 Homeobox Transcription Factor Family AT4G04890 78.273 0.0 1172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bach11g00395 START 2e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00395 K09338 - qsu:112016283 1229.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00395 11 2745724 2749242 Bach11g00395 11 2745724 2749242 ECH