Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00393 ATGGCTAGCCGTCAACCTCTGCTAGACAATCCCAGAAGATCAATTTCCAAAACTGTGTGGCTAATTGTCTCAGTAGTTGCTATTATTAATTCATCAGCTCTCATTGCTTCTTATCTGATCAAACCCACCTCCTTCTTCAACCTTTCCTTGCCCCATTCCTACCATGTCTGTGAAAAAGCCATTAACAGAGCCTCTTGCATAGCTCATGTCTCAGAAGTGGCCAAAGGTTCAATCTTTACCACAAAAGGCTATAGTTTGATCAAATTGCTGCAATCCCACTTGATGAAAACAACCACACATATTCAAAAAGCTATGGACACAGCCAACACCGTAAAATACCGAATCAACAATCCAAAGGAGCAAGCTGCTCTACGTGATTGTGAGCAGCTCATGGACCTGTCCATCAGCAGAGTTTGGGATTCAATGGTTGCTCTTACAAACAAGAGCATAATTTCCCAGCAAGATGCACACGCTTGGCTAAGCAGTGTGCTCACTAACCACGCCACTTGCTTGGATGGTTTAGAGGGTTCATCTCGTGCCCTCATGGAGGCAGAGCTCGAGGACTTGATATCCAGGGCAAGAACCGCTCTGGCCATGCTTGTTACCATTTTGCCTCTTAAGACTGAAATAATGGATGAGTCTCTAAATGAGGATTTCCCCTCTTGGGTGACAAGCAAGGATCGTAAGCTCTTACAGTTATCAGCTAAGGAAATCAATGCCAATGTTGTGGTTGCTAAGGACGGGAGTGGCAAATTCAAGACTCTGGCAAAAGCTGTGGCATCGGCACCAGACAACAGTAAGACAAGGTATGTTATTTATGTGAAGAAGGGGATTTACAAAGAGAATGTCAAGATTGGGAGGAAAAAGAAGAACGTGATGCTTGTTGGTGATGGCATGGACGCCACAATTATCACCGGGAGCTTGAATTACGTAGATGGAACAACAACATTCAATTCTTCCACCGTTGGTATGAACCTAACTCATCATCATCTTGTCCTTTTCTTTTAG 1008 0.4395 MASRQPLLDNPRRSISKTVWLIVSVVAIINSSALIASYLIKPTSFFNLSLPHSYHVCEKAINRASCIAHVSEVAKGSIFTTKGYSLIKLLQSHLMKTTTHIQKAMDTANTVKYRINNPKEQAALRDCEQLMDLSISRVWDSMVALTNKSIISQQDAHAWLSSVLTNHATCLDGLEGSSRALMEAELEDLISRARTALAMLVTILPLKTEIMDESLNEDFPSWVTSKDRKLLQLSAKEINANVVVAKDGSGKFKTLAKAVASAPDNSKTRYVIYVKKGIYKENVKIGRKKKNVMLVGDGMDATIITGSLNYVDGTTTFNSSTVGMNLTHHHLVLFF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00393 335 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 203 IPR035513 -
Bach11g00393 335 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Bach11g00393 335 Gene3D - 235 331 IPR012334 -
Bach11g00393 335 Pfam Pectinesterase 241 325 IPR000070 GO:0030599|GO:0042545
Bach11g00393 335 CDD PMEI-like_4 61 203 - -
Bach11g00393 335 PANTHER PECTINESTERASE 28 325 - -
Bach11g00393 335 NCBIfam pectinesterase inhibitor domain 56 181 IPR006501 GO:0004857
Bach11g00393 335 SUPERFAMILY Pectin lyase-like 239 324 IPR011050 -
Bach11g00393 335 Pfam Plant invertase/pectin methylesterase inhibitor 56 198 IPR006501 GO:0004857
Bach11g00393 335 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 200 IPR035513 -
Bach11g00393 335 SMART PMEI_2 46 199 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00393 Bach-Chr11 2732320 2733327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00393 3 325 Carbohydrate Esterase AT1G11580 45.808 6.18e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00393 K01051 - gmx:100815836 425.246