Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00392 ATGGCTAGCTATCAACCTCTGCTAGACAATCCCAGAAGATCAATTTCCAAAACTGTGTGGCTAATTGTCTCTTTAGTTGCTATCATAAGTTCATCAGCTCTCATTGCTTCTTATCTGATCAAACCCACCTCCTTCTTCAACCTTTCCTTGCCCCATTCCCACCATGTCTGTGAAAAAGCCATTGACAGAGCCTCTTGCATAGCCCATGTCTCGGAAGTGGCCAAAGGTTCAATCTTTACCACAAAAGACGACAGTTTGATCAAATTGCTGCAATCCCACTTGATGAAAACAGCCACACATGTTCAAAAAGCTATGGACACGGCCAACACCGTAAAATACCAAATCAACAATCCAAAGGAGCAAGCTGCTCTACGTGATTGTGAGCAACTCATGGACTTGTCCATCGACAGAGTTTGGGATTCAATGATTGCTCTTACAAATAAGAGCGTCATTTCCCAGCAAGATGCACACGCTTGGCTAAGCAGTGTTCTCACTAACCACGCCACTTGCTTGGATGGTTTAGAGGGTTCACCTCGTGCCCTCATGGAGACAGAGCTCGAGGACTTGATATCCAGAGCAAGAACCTCTCTGGCCATGCTTGTTACCATTTTGCCTCCAAAGACTGAAATAATTGAAAAGCCTCTAAATGGGGATTTCCCCTCTTGGGTGACAAGCAAGGATCGTAAGCTTTTACAGTTATCGGCTAAGGAAATCAATGCCAATGCTGTGGTTGCTAAGGACGGGAGTGGCAGATTCAAGACTGTAGCAGAAGCTGTGGCATCGGCACCAGACAACAGTAAGACAAGGTATGTTATTTATGTGAAGAAGGGGATTTACAAAGAGAATGTTGAGATTGGGAAGAAAAAGAAGAACGTGATGCTCGTTGGTGATGGCATGAACGCCACAATCATCACCGGGAGCTTGAATTACGTAGATGGAACAACAACATTCAAGTCTGCCACCGTTGGTATGAACCTTAACTCATCATCATCATCATGTCCTTTTCTTTTAGCTCATTTTTATGAACCTTAA 1032 0.4409 MASYQPLLDNPRRSISKTVWLIVSLVAIISSSALIASYLIKPTSFFNLSLPHSHHVCEKAIDRASCIAHVSEVAKGSIFTTKDDSLIKLLQSHLMKTATHVQKAMDTANTVKYQINNPKEQAALRDCEQLMDLSIDRVWDSMIALTNKSVISQQDAHAWLSSVLTNHATCLDGLEGSPRALMETELEDLISRARTSLAMLVTILPPKTEIIEKPLNGDFPSWVTSKDRKLLQLSAKEINANAVVAKDGSGRFKTVAEAVASAPDNSKTRYVIYVKKGIYKENVEIGKKKKNVMLVGDGMNATIITGSLNYVDGTTTFKSATVGMNLNSSSSSCPFLLAHFYEP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00392 343 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 203 IPR035513 -
Bach11g00392 343 Pfam Plant invertase/pectin methylesterase inhibitor 55 198 IPR006501 GO:0004857
Bach11g00392 343 Gene3D - 235 332 IPR012334 -
Bach11g00392 343 SUPERFAMILY Pectin lyase-like 239 325 IPR011050 -
Bach11g00392 343 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Bach11g00392 343 PANTHER PECTINESTERASE 29 325 - -
Bach11g00392 343 Pfam Pectinesterase 241 325 IPR000070 GO:0030599|GO:0042545
Bach11g00392 343 SMART PMEI_2 46 199 IPR006501 GO:0004857
Bach11g00392 343 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 199 IPR035513 -
Bach11g00392 343 NCBIfam pectinesterase inhibitor domain 54 179 IPR006501 GO:0004857
Bach11g00392 343 CDD PMEI-like_4 61 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00392 Bach-Chr11 2727207 2728238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00392 3 325 Carbohydrate Esterase AT1G11580 45.808 1.94e-85 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00392 K01051 - gmx:100815836 426.787