Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00333 ATGGCTTTGGAGGCTCTGAATTCTCCTACAGCAGCAACTACTCCCTTCACCACCGCCTATGAAGACCATGAGGGTGACGTTGACCTTCACTGCCTTGAGCCATGGGCCAAAAGGAAGCGCTCCAAACGACCCCGTTTCGAGAACCCACCAACAGAAGAAGAGTACCTTGCTCTCTGCCTCATCATGCTCGCCCACAGCGGCAACAAGACCAAGACCACCATCGCTACCTCTGTGCAGCTTAATGAAATAGAGACAAAGCCACAGCCACAGGGCCCTCAAGGACAAGCAACGCCGCCTATGAAGCTGTCTCATAGGTGTACAGTTTGTAACAAAGCTTTTTCATCATATCAAGCACTTGGCGGCCACAAAGCCAGCCACCGCAAGTCCTCGTCGGAAGCCGTCACCAATACCAACACCACCGACAACGCCTCAGCCTCCGCCTCCACCTCTACCACCACCACCACTAGTGGTAGGATGCACGAGTGTTCTATCTGTCACAAGACTTTTGCTACTGGTCAAGCCCTTGGCGGCCACAAACGGTGTCACTATGATGGCGGCAACAGCAAAGACAACGGTAACAACAGCAGCGGTTTAACTTTCTCCGAGGGCGGTACCTCCGCCCACAGCAACCGTGGATTTGACCTGAACCTTCCTGCACCGTTGACTGACTTCTGGTCGCCGGGGTTCGGCGGCGAACAAGAGGTGGAAAGCCCTCTACCGGTCGCCGCCAAGAAACCGCGTTTGTTTTCGGGTGAAAACAACGTAGGTTCGCAAGAAAAGTGA 783 0.5428 MALEALNSPTAATTPFTTAYEDHEGDVDLHCLEPWAKRKRSKRPRFENPPTEEEYLALCLIMLAHSGNKTKTTIATSVQLNEIETKPQPQGPQGQATPPMKLSHRCTVCNKAFSSYQALGGHKASHRKSSSEAVTNTNTTDNASASASTSTTTTTSGRMHECSICHKTFATGQALGGHKRCHYDGGNSKDNGNNSSGLTFSEGGTSAHSNRGFDLNLPAPLTDFWSPGFGGEQEVESPLPVAAKKPRLFSGENNVGSQEK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00333 260 SMART c2h2final6 104 126 IPR013087 -
Bach11g00333 260 SMART c2h2final6 160 182 IPR013087 -
Bach11g00333 260 MobiDBLite consensus disorder prediction 81 97 - -
Bach11g00333 260 MobiDBLite consensus disorder prediction 186 205 - -
Bach11g00333 260 MobiDBLite consensus disorder prediction 123 157 - -
Bach11g00333 260 Pfam C2H2-type zinc finger 160 184 - -
Bach11g00333 260 Pfam C2H2-type zinc finger 104 128 - -
Bach11g00333 260 MobiDBLite consensus disorder prediction 130 157 - -
Bach11g00333 260 MobiDBLite consensus disorder prediction 226 260 - -
Bach11g00333 260 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 40 219 IPR044653 GO:0003700
Bach11g00333 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 182 IPR013087 -
Bach11g00333 260 MobiDBLite consensus disorder prediction 81 101 - -
Bach11g00333 260 MobiDBLite consensus disorder prediction 187 205 - -
Bach11g00333 260 Gene3D Classic Zinc Finger 101 182 - -
Bach11g00333 260 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Bach11g00333 260 ProSitePatterns Zinc finger C2H2 type domain signature. 162 182 IPR013087 -
Bach11g00333 260 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Bach11g00333 260 SUPERFAMILY beta-beta-alpha zinc fingers 104 182 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00333 Bach-Chr11 2256404 2257186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00333 1 248 C2H2 Transcription Factor Family AT1G27730 45.098 1.54e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach11g00333 zf-C2H2_6 1.5e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00333 - - aprc:113872812 306.99