Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00316 ATGATGGCAGCTGATGCTGTGGGCGTGGATGTTTCCTCTGAACAAATGAGTAGTCAAACTGGAAATTTGGCATGCCATAATCACATTACATCTGAGCAGATGCATGAATTTGATTCTGGAACTGCACATGTTGAATCGTCTGAAAAAACACATGAGATTGGTTCTGAATGTTCAAGTGATGAACATAAGGTGGTTGGAACTTTAGTTGCTAGCTCTGTTGTTGATGAAAAATTAAATCAAACTTCTGATAACATGAGTAGGAGCTCTGTCATTCAGCCGCTTGGAACTTCTCAATGTGAACTAGGAAAGAGTTGTCAGACTGAGGAAGGTTCTTGCCTTCAACGGTGCGCCATAGAATCGGTTTCTTGTATTTTATCTAATGATAATTCCACAAAGATATTCCACCCACCATCCCAAGTTGTTCAAGATGAACCTGTAGAAAACTCAGAAAAGATATGTCAGCTACCTTCCAAAGATGTTCAAAATGAACCCATAGAAAAAAGTGATACAACAACTAGTTTTCACGTTAAAGACCTGATGCAATCAGTTCCTCAACAGGTAAATTCAGGGAATGAGCAACTGGTTCCACATTCTGGAGATGTTGTCAACAATGCTAGTTCTGAATGTTTTGATGCGAAGTCTAAAAGGGCAACTTGTATCCGATTGGGGTGCAAGGCTAAAAAAACACCAAAACCATTGAAGAAGAAATATATGCTAAGATCATTAGGAGGCAGTGACCGGGCTTTGCGGTCTAGGTCCCGAGAAAAACCCAAAGCACCTCAACCTAATAGTAACTTGGTTAATGATGATGACGGTGGAGTGAACAGGAGGGAAGGGAGGAAGAGGAGAGGTAGAAAGAAGAAAAAGAGAAGTGGGGAGGGGATGTCTGATGAATTTTCAAGAATCAGAACACGATTAAGATATCTTCTGAACCGAGTGAGCTATGAGCAAAGCTTGATTGATGCTTACTCTGGTGAGGGATGGAAAGGATACAGCTTGGAAAAATTAAAGCCTGAGAAGGAGCTCCAACGGGCCAAGTCTGAAATACTTCGGCGTAAATTGAAAATTAGGGATCTGTTTCGACATCTGGATACATTATCTGCTGAAGGAAGGCTTCCAAAATCCTTGTTTGATTCTGAAGGAGAGATTTGCAGTGAGGATATATTCTGTGCAAAGTGCAGGTCCAAAGACTTGACTATTGACAATGATATAATACTCTGTGATGGTGTCTGTGACCGTGGGTTTCATCAGTTCTGTTTGGAACCTCCATTACTAACTGAAAACATTCCAGCTGGCGAAGAGGGTTGGCTTTGCCCTGGTTGTGACTGTAAAGATGATTGCATTGATCTTCTCAATGACTCCTTAGGAACAAGTCTATCTCTAAGTGACACCTGGGAGAGGGTTTTTCCTGAAGCAGCTGCAACCATTGGAAATAATTTGGATCACAACTTGGGACTTCCTTCGGATGATTCTGATGATGATGATTATAATCCTGATGTTACAGAAAATGGGGAGCCTAGAGGAGGTGAATCGAGATCTGATGAATCTGAGTCATCTTCTGATGAATCTGATTATTCTTCTGCTTCTGAGGAATTTAAGGCTTCACCTTCTGATGAATTGAAGGCTAGACATAAAAAAGATCCATATTTAGGTCTTCCTTCTGATGACTCAGAGGATGATGATTTTGATCCAAATGCTCCAGACATTGAAAGAAAAGACATAGAGGAAAGTTCAAGTTCTGATTTCACGTCTGACTCTGAGGATCTTACAGCTGCAATTGATGTTAGACAGGATCAGGATCCTATTTCTGCATCCCTGAATGATGTTACACTGTCCAAAGGTTCTGGTAGACTAAAATGTAAAGTTGGTAAGAAGCAATCCCTTGCTGATGAGCTGTCATCTTTAATAGAGCCAGATCCTGGCCTAGAGGGCTCTAATCCTGTTTCTGGGAAAAGAAACATAGAAAGGCTGGACTACAAAAGGCTGTATGATGTGACGTACCAAAATGTGCAGTCTAGTAGTAGTGATGATGAAGATTGGACTGAGACTGCTAATCCTAGTAGTAGTGATAATGTGCAGTCTAAAAGACAGAAAGAAACTGCACATACTCCTAGGAGAAATACTCGTCAGAAAAAAAATGTAAGTACAGGTAAGTCACCCATCAAATCATCTGAAGGCTCTAGATCTTCAACTTACAGAAGACTGAGTGAAGCTGTAGTTCAGAGACTTTATAAATCCTTTAATGATAATCAGTACCCAGTACGTGCCGCAAAAGAAAGCTTGGCACAAGAACTAGGACTCACACTCCAACAGGTTAGCAAATGGTTTGAGAATTCCCGCTGGAGATTTCGACATTCATCACATTTAGAAGCCAGCTCAAGTGGAAATCCCTCACAGCAGGCTACTTGCAGCAGAGCTGAAAATGGGGAATTACTCGGGGATGAAGAGGAAAGGAAATCTGAATTGATGTCACAGGAAGGCAGTAGAGAAAATCCAATAACCCCAAGCACTAGAAAGAGGAAACAAAAGTCGGATCCCCAGGCATCTGATGCAAATGTGGGCAATGATAGTGCAGCAACAAAGCCTCCTGCTGGCTCACCAAGAGCTCATATTGTGCAAACAGGTCAGAAAACGAAGACAAGGAAAAGAAGATGA 2655 0.4147 MMAADAVGVDVSSEQMSSQTGNLACHNHITSEQMHEFDSGTAHVESSEKTHEIGSECSSDEHKVVGTLVASSVVDEKLNQTSDNMSRSSVIQPLGTSQCELGKSCQTEEGSCLQRCAIESVSCILSNDNSTKIFHPPSQVVQDEPVENSEKICQLPSKDVQNEPIEKSDTTTSFHVKDLMQSVPQQVNSGNEQLVPHSGDVVNNASSECFDAKSKRATCIRLGCKAKKTPKPLKKKYMLRSLGGSDRALRSRSREKPKAPQPNSNLVNDDDGGVNRREGRKRRGRKKKKRSGEGMSDEFSRIRTRLRYLLNRVSYEQSLIDAYSGEGWKGYSLEKLKPEKELQRAKSEILRRKLKIRDLFRHLDTLSAEGRLPKSLFDSEGEICSEDIFCAKCRSKDLTIDNDIILCDGVCDRGFHQFCLEPPLLTENIPAGEEGWLCPGCDCKDDCIDLLNDSLGTSLSLSDTWERVFPEAAATIGNNLDHNLGLPSDDSDDDDYNPDVTENGEPRGGESRSDESESSSDESDYSSASEEFKASPSDELKARHKKDPYLGLPSDDSEDDDFDPNAPDIERKDIEESSSSDFTSDSEDLTAAIDVRQDQDPISASLNDVTLSKGSGRLKCKVGKKQSLADELSSLIEPDPGLEGSNPVSGKRNIERLDYKRLYDVTYQNVQSSSSDDEDWTETANPSSSDNVQSKRQKETAHTPRRNTRQKKNVSTGKSPIKSSEGSRSSTYRRLSEAVVQRLYKSFNDNQYPVRAAKESLAQELGLTLQQVSKWFENSRWRFRHSSHLEASSSGNPSQQATCSRAENGELLGDEEERKSELMSQEGSRENPITPSTRKRKQKSDPQASDANVGNDSAATKPPAGSPRAHIVQTGQKTKTRKRR 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00316 884 MobiDBLite consensus disorder prediction 809 825 - -
Bach11g00316 884 ProSitePatterns Zinc finger PHD-type signature. 390 441 IPR019786 -
Bach11g00316 884 MobiDBLite consensus disorder prediction 233 296 - -
Bach11g00316 884 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 112 861 - -
Bach11g00316 884 CDD homeodomain 733 787 IPR001356 GO:0003677
Bach11g00316 884 Gene3D - 726 798 - -
Bach11g00316 884 SMART PHD_3 389 442 IPR001965 -
Bach11g00316 884 MobiDBLite consensus disorder prediction 713 733 - -
Bach11g00316 884 MobiDBLite consensus disorder prediction 534 553 - -
Bach11g00316 884 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 337 450 IPR013083 -
Bach11g00316 884 MobiDBLite consensus disorder prediction 505 519 - -
Bach11g00316 884 Pfam PHD-finger 389 444 IPR019787 -
Bach11g00316 884 ProSitePatterns 'Homeobox' domain signature. 761 784 IPR017970 GO:0000981|GO:0006355
Bach11g00316 884 ProSiteProfiles 'Homeobox' domain profile. 726 786 IPR001356 GO:0003677
Bach11g00316 884 MobiDBLite consensus disorder prediction 788 806 - -
Bach11g00316 884 ProSiteProfiles Zinc finger PHD-type profile. 387 444 IPR019787 -
Bach11g00316 884 MobiDBLite consensus disorder prediction 670 694 - -
Bach11g00316 884 MobiDBLite consensus disorder prediction 670 733 - -
Bach11g00316 884 CDD PHD_PRHA_like 389 441 IPR045876 -
Bach11g00316 884 SMART HOX_1 728 790 IPR001356 GO:0003677
Bach11g00316 884 Pfam Homeodomain 732 785 IPR001356 GO:0003677
Bach11g00316 884 SUPERFAMILY Homeodomain-like 728 788 IPR009057 -
Bach11g00316 884 MobiDBLite consensus disorder prediction 565 579 - -
Bach11g00316 884 MobiDBLite consensus disorder prediction 632 655 - -
Bach11g00316 884 FunFam Homeobox protein HAT3.1 370 449 - -
Bach11g00316 884 MobiDBLite consensus disorder prediction 478 588 - -
Bach11g00316 884 SUPERFAMILY FYVE/PHD zinc finger 379 447 IPR011011 -
Bach11g00316 884 MobiDBLite consensus disorder prediction 787 884 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00316 Bach-Chr11 2143946 2147941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00316 190 843 Homeobox Transcription Factor Family AT3G19510 41.160 2.67e-130 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Bach11g00316 Homeodomain 1.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00316 - - gmx:100306715 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00316 11 2143946 2147941 Bach11g00316 11 2143946 2147941 ECH