Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00303 ATGAATCAAGATTCCGCAATGGAGGCGTTGCAGAAGGATTTGGATCGGGTCAAGGGTCCATGGAGCCCAGACGAGGACGATTTGTTGAAGAAGCTTGTGCAACGACATGGCCCTAGGAATTGGTCGATCATCAGCAAATCGATTCCTGGTCGGTCTGGGAAGTCCTGCCGCCTGCGGTGGTGCAACCAGTTATCACCAGATGTAGAGCACCGACCATTCACTCCCGAGGAGGACGAGACTATCATGAAGGCCCACGCCAAATACGGCAACAAGTGGGCCACCATAGCCAGGCTCCTCAACGGTCGTACGGATAACGCTATTAAGAACCATTGGAACTCCACTTTAAAGCGCAAGTACTCGTCGTTGATCGGCGATGAAGCTGGAGCTGACGAGGCCTCATTTCAACCGGCGAAAAAGCCAGCTACCAGCGATCGTGCTCCACCGATATCTTCGATCTCAGCCGGACACTGTTACAGTCCCAGTAGCCCATCAGGATCGGATGTGAGTGATTCAGGTATCCCTGTAGCATCTTCTTCACAGGCGATTCGTCCTGTTGCGATAAACGGTGCGATCCTGCCGCCTTCCCAGCAGGCGGAGTCACGCCCGAGTTCTATCAGCAACAGCGAGCCTTCAACTGAGCTCTCTTTGTCTCTTCCTGGAATGCACTCGTTCGACTTACCACGACAAAACTTGGGTCCCTCTGCAGAGCAGTGTGGATTATCGTCACCAGCGCCAGCGCCACCTGAGAAGGATTCGCCAATGATGAGTTTTGGGCCCCAATTACTCTCTGTGATGAAGGAGATGATCAGAGATGAGGTGAGAAATTACATGACGGGGCTTCTTGAGGAGAGATTGAGCTCAAGTACTGATAGTGTGGGTGTTGCTGCTGGGTTGAAACGCACCGGAATTACAAAGCTTAATTGA 924 0.5238 MNQDSAMEALQKDLDRVKGPWSPDEDDLLKKLVQRHGPRNWSIISKSIPGRSGKSCRLRWCNQLSPDVEHRPFTPEEDETIMKAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKYSSLIGDEAGADEASFQPAKKPATSDRAPPISSISAGHCYSPSSPSGSDVSDSGIPVASSSQAIRPVAINGAILPPSQQAESRPSSISNSEPSTELSLSLPGMHSFDLPRQNLGPSAEQCGLSSPAPAPPEKDSPMMSFGPQLLSVMKEMIRDEVRNYMTGLLEERLSSSTDSVGVAAGLKRTGITKLN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00303 307 Pfam Myb-like DNA-binding domain 18 64 IPR001005 -
Bach11g00303 307 Pfam Myb-like DNA-binding domain 72 114 IPR001005 -
Bach11g00303 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 68 IPR017930 -
Bach11g00303 307 MobiDBLite consensus disorder prediction 1 22 - -
Bach11g00303 307 MobiDBLite consensus disorder prediction 146 177 - -
Bach11g00303 307 SMART sant 17 66 IPR001005 -
Bach11g00303 307 SMART sant 69 117 IPR001005 -
Bach11g00303 307 FunFam Transcription factor MYB44 72 118 - -
Bach11g00303 307 CDD SANT 72 115 IPR001005 -
Bach11g00303 307 FunFam MYB transcription factor 18 69 - -
Bach11g00303 307 ProSiteProfiles Myb-like domain profile. 13 64 IPR001005 -
Bach11g00303 307 MobiDBLite consensus disorder prediction 194 218 - -
Bach11g00303 307 MobiDBLite consensus disorder prediction 194 255 - -
Bach11g00303 307 Gene3D - 17 69 - -
Bach11g00303 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 119 IPR017930 -
Bach11g00303 307 MobiDBLite consensus disorder prediction 130 177 - -
Bach11g00303 307 SUPERFAMILY Homeodomain-like 15 111 IPR009057 -
Bach11g00303 307 PANTHER MYB PROTEIN-RELATED 18 195 - -
Bach11g00303 307 Gene3D - 72 118 - -
Bach11g00303 307 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Bach11g00303 307 CDD SANT 20 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00303 Bach-Chr11 2060725 2061648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00303 11 280 MYB Transcription Factor Family AT4G37260 49.485 1.81e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach11g00303 Myb_DNA-binding 8.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00303 K09422 - qsa:O6P43_031073 339.347