Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00277 ATGGCGGCGCAGGCACAAGGAATTGAATCGGTTCAATGTTTTGGGCGTAAGAAGACTGCTGTGGCTGTGACCTACTGTAAAAAGGGTCGTGGATTGATCAAGATCAATGGGTGCCCAATCGAGCTTGTGGAACCAGAGATTCTCCGGTTCAAGGCATTCGAGCCCATCCTTCTGTTGGGGAGACACCGTTTCAATGGAGTCGACATGCGTATCCGTGTCAAGGGTGGTGGTCACACCTCACAGATATACGCAATTCGCCAGAGCATAGCCAAAGCCCTCGTCGCTTTCTATCAGAAGTATGTGGATGAGCAGAGCAAGAAGGAGATCAAGGACATCCTCGTCAGGTATGATCGAACTCTCCTTGTTGCTGATCCAAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAGTCCTACCGTTGA 444 0.518 MAAQAQGIESVQCFGRKKTAVAVTYCKKGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHRFNGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00277 147 Gene3D - 2 147 IPR014721 -
Bach11g00277 147 SUPERFAMILY Ribosomal protein S5 domain 2-like 10 147 IPR020568 -
Bach11g00277 147 FunFam 40S ribosomal protein S16 3 147 - -
Bach11g00277 147 Pfam Ribosomal protein S9/S16 15 147 IPR000754 GO:0003735|GO:0005840|GO:0006412
Bach11g00277 147 ProSitePatterns Ribosomal protein S9 signature. 75 93 IPR020574 GO:0003735|GO:0005840|GO:0006412
Bach11g00277 147 PANTHER RIBOSOMAL PROTEIN S9 6 144 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00277 Bach-Chr11 1882680 1883123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00277 1 147 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 86.395 1.64e-92 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00277 K02960 - cit:102615654 283.493