Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00275 ATGCATGGTCAGAGAAGGACTATTGGGTCCTTCCCTGGAATTGTTAGTATGATGCAGGGGCCGAGTTCTAGTGGCTCTGATATGAATCAGCAGACTGCCTTGAGTCACATGCAAACCACAGTAGATTTGCCAAATTATGTGGGATCTGCTGGGGAGACTACATGTTTATGTACTACTGACCCTGATGTTCCAAGCTTCAGCAGCTGGAATAACAGCCAACCTAGTTCTTCATTGAATCTGCACAACCAAGCCGATGATGATTGGCTGAAAACAGAGCATGGCTGGTCTTCTTTATGTAGTTCTCAATCTGAGGATAATATGAGACTAGAAGAAAGGCAGTTTGAAACAAATGATGTAATTTTTCCTGTTAGTTCAAATACTAATTTACATGGGAATCACTCCACAATTGAGCCTTTCTCTTTGCAAGGTTCCTGCCCCAATCATGTTGCCCATAATGTAAATCTAAGTATGGGCCACAATACCAACTCTGCTAATCGTGGGAAGGGCAAAGAAAGTGGTAGTGGTGTTAATATCCGCAATCCAAATGGGTTAAATATAGAGCAGTCATCATTTGGCAGTGCATCGTGTGATCATGTAGGAACTTCATCTGGAAGCTCTGGTCACATGAGTGGGGGAGATAATGCAAGTTCAAGTTCTTCTTTAGTAAATTGGGGTTCTTTGTGCAAGAGAAAGGCCCTTGAAGGTACTTCTGGCCAACTGTGTACAGGAGGAAGCTCAAGCTCTCTTTTTGAAGCTGAACATGGTTGCTGGAATACAGGTCTTGCTGATCTTAATGCCTCTAGCAGTCTAAGTATTTCTACCCCTTCAGAGGATATTCCTATTACTAGTCATCCAGCACATCAGAACACTAGAAATGAGGTGAGGCAAGCGGCTTCTGATGCATTCTCTTTGGTTAGTATTATGGGAAATGTTGAAAGGCCTCTGAGAAATTCTAATAGGATGATAAACCATGTACAACATCACGAGGCCGTACCTTTCAATTTATCATCAAACGGAAGTGCCAGGCATCCTAACCAATCTTCTCCTCATCATATACTTAGCTCTAACCCATTTAATGATTCTTTGGAGTTGAGGTTAACTGCAGGAGTAACAGCTGCCAATTCTACTTCTCCTCAAAGCCAGTCACGTGCCTTGCAAGTACCTGGTTTGTCAGGGAACTCAAATCCTTTTCCTTGGAATGGAGCTGCTAATCAAAGGGGCAGCAGCTTATCAACTTCTTATAATCATGGCGAAAGACCAGTACGAGAAGAATTAAACTTAAGAATCTTCCAAAGAGACAGTACTGAGCACCCCATGCTTCTGCCTTCATCTTCAGGGCATGACCCTACAAATTGGCATATGTCCTCTGGTCACTTGAACAATTCTGGAGGTGTACCACCAGCATCTTGGATTGGGTCCAGTTCAAGCGTCCATTCTTTGCCTAGTCCCAGCTGGATTGTTCCCCATGAAGTCCCAACACAGAATCAGCAAAGATTAGAGTTCAACCCTTGGTCCTTTTTCCCATCAATTAGCTCTGCATCTGGTGTTCATAATGGCCATTCTGCCTCATCCGCTTCGGGGTCCCCCTCCTTTACTCATGATTCTAGAAACTCTCAACCATATCCAAGATCAGCAGCATTTGGGGACAGAAGGGGTGATGATGTTTTCAGTGCTCCACGTTCATTGCGAGCTTTATCTGTCGACATTGAGGGGAGACGCCGACTAATATCTGAGATACGCCAAGTCTTGAATGCAATGCGTAGGGGCGAGAACTTACGAACTGAGGAATATATGCTCTTTGACCCTTTCATATTTCATGGCATGGCTGAAATGCATGACAGACACAGGGACATGCGCCTTGATGTTGATAACATGTCATATGAGGAATTGTTAGCGTTGGAGGAGCACATAGGGGATGTGAGCACTGGATTAAGTGAGGATATCATTATGAAGGTGATGAAACAGAGAATCTATTTGTCTATGATGACAGATTGTTCTACAGATCTAGAACCTTGCTGTATCTGTCAGGAGGAGTATTCTGATGGAGAGGATATTGGTTCACTGGATTGTGGGCATGAATTCCACACAAACTGCATCAAGCAATGGTTAACACAGAAGAATCTCTGCCCTATTTGTAAAACGACAGCCTTGGCTACACAATAG 2163 0.4364 MHGQRRTIGSFPGIVSMMQGPSSSGSDMNQQTALSHMQTTVDLPNYVGSAGETTCLCTTDPDVPSFSSWNNSQPSSSLNLHNQADDDWLKTEHGWSSLCSSQSEDNMRLEERQFETNDVIFPVSSNTNLHGNHSTIEPFSLQGSCPNHVAHNVNLSMGHNTNSANRGKGKESGSGVNIRNPNGLNIEQSSFGSASCDHVGTSSGSSGHMSGGDNASSSSSLVNWGSLCKRKALEGTSGQLCTGGSSSSLFEAEHGCWNTGLADLNASSSLSISTPSEDIPITSHPAHQNTRNEVRQAASDAFSLVSIMGNVERPLRNSNRMINHVQHHEAVPFNLSSNGSARHPNQSSPHHILSSNPFNDSLELRLTAGVTAANSTSPQSQSRALQVPGLSGNSNPFPWNGAANQRGSSLSTSYNHGERPVREELNLRIFQRDSTEHPMLLPSSSGHDPTNWHMSSGHLNNSGGVPPASWIGSSSSVHSLPSPSWIVPHEVPTQNQQRLEFNPWSFFPSISSASGVHNGHSASSASGSPSFTHDSRNSQPYPRSAAFGDRRGDDVFSAPRSLRALSVDIEGRRRLISEIRQVLNAMRRGENLRTEEYMLFDPFIFHGMAEMHDRHRDMRLDVDNMSYEELLALEEHIGDVSTGLSEDIIMKVMKQRIYLSMMTDCSTDLEPCCICQEEYSDGEDIGSLDCGHEFHTNCIKQWLTQKNLCPICKTTALATQ 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00275 720 MobiDBLite consensus disorder prediction 372 416 - -
Bach11g00275 720 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 224 717 IPR045191 GO:0061630
Bach11g00275 720 MobiDBLite consensus disorder prediction 441 473 - -
Bach11g00275 720 SUPERFAMILY RING/U-box 671 716 - -
Bach11g00275 720 MobiDBLite consensus disorder prediction 516 552 - -
Bach11g00275 720 MobiDBLite consensus disorder prediction 516 542 - -
Bach11g00275 720 FunFam E3 ubiquitin-protein ligase MBR2 639 717 - -
Bach11g00275 720 ProSiteProfiles Zinc finger RING-type profile. 672 713 IPR001841 -
Bach11g00275 720 MobiDBLite consensus disorder prediction 334 356 - -
Bach11g00275 720 MobiDBLite consensus disorder prediction 157 216 - -
Bach11g00275 720 Pfam Ring finger domain 672 713 IPR001841 -
Bach11g00275 720 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 635 717 IPR013083 -
Bach11g00275 720 SMART ring_2 672 712 IPR001841 -
Bach11g00275 720 MobiDBLite consensus disorder prediction 372 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00275 Bach-Chr11 1871698 1875139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00275 18 719 C3H Transcription Factor Family AT2G15530 34.590 7.69e-108 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00275 - K19041 gmx:100809024 926.006