Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00272 GTTTCCATGGCACAGTTAACAGGGCAGCCTGCTTCAACTTTGGACTCGATACCTCTTGTTCAGACTAATTAAGCTGCTTCTTTATTACTTTAGGGTTGCTTGATTCCCAGGAACTCATCGAAGGTTGTTGAATTACCTTCACTAATCATTGGAATTTCTGATTTTCTACTCAAATGATGATTACACCAAATAAATCAACATCCACGATATCTTCAGACTCCGTGGAACAGAAGGGGACAAATATAACTGAGCCAGATGCAAACGTGCTTCAATCTCCTTTAAACCAACAACTTCGTAGTTCCTCTGATGGTCCGGTGGCCATCCTTTGGGATATTGAAAACTGTCCTGTTCCAAGTGATGTCCGCCCTGAAGATGTAGCTGGTAATATAAGAATGGCTTTACGGGTTCATCCAGTAATTAAAGGAGCAGTTATGATGTTTTCTGCTTATGGGGATTTCAATGCCTTCCCCAGACGGCTGAGGGAGGGCTGTCAAAGAACTGGTGTCAAACTCATTGATGTTCCCAATGGGAGAAAGGATGCTGCTGACAAAGCCATCTTGGTTGACATGTTCTTGTTTGCCCTGGACAACCGTCCCCCTTCTTCTATCTTGTTGATATCTGGAGATGTTGATTTTGCCCCAGCACTTCACATTCTTGGTCAAAGGGGATACACTATAATTCTCGTCATCCCTTCTGGGGTAGGCATTTCATCTGCCCTCAGCAATGCTGGCAAATTTGTATGGGACTGGCACAGTGTGGTTCGTGGTGAAGGTTTTGTGCCCCCGTCAAAGGCTTTAGTGCCACCTCGTATGGGTTCAAATGAGGTTGCTGGATATCTTATGCAGTGCCATATCAATGACAACCTGGATGGACAAAATGAAGAAGAAGCAATAGTTTATAGAGGGATCTCACAGAGCTATTATAACTCCAGGGATTTCTCAGTAGGATCACAATCTCTATCTGAATACAACAGTGGTACCTCTAATGTATCTTGTTTTCCAACAACCTTTAGGTCACATAGCCTTCCATCTGGATTGACTGGGGTGTCAGGAGAACCGATGTCTTTGAGTGACCAAAATGAATGCCTATCGGGTGTACAACCTGAGGATTTAAATGGTCTTAAGAGTCAGCTGGTCAGGTTACTTGAACTTTCTGGAGGATGCCTACCACTGACCCAAGTTCCAGCGGAGTACCAAAAAAATTTTGGAAAACCTCTTCACCTAGCGGAATATGGGGTACGCAAACTCGTAAATCTTTTCAAGAAGATGGGTGACACCATGGCTATAGAAGGAAAAGGGCAAGGAAAAATTGTATATCTTCGAAACTGCAAAGCAGGCCCAAGTGCCCCCCCTTTGGCCCTCGCGAGAAAGAAGAAAGGGAAGGGTGTTCAGGATGAGAATGTTGATGCTGTCAATGGTGGTTGCTCTTTGGATGAGTTCTCAGATGAGGAAAGAGTAGTCATAGAAGGGCATGATGAGCAAAGTAGCTTAAGAAATGGTCATCTGGGAAGAGCAGCCAGATGTGAAATTGATGACATTGAGCAGTTCAAGCACGAGCTGCAAGAGATTCTAGTCAGCTATTCTTGTGGAATACTAATAGGTTGTTTTGAGGCCATATACCAGCAGCGGTACAAGAGACAACTGGAATACCAAAGATTTGGTGTGGACAAGTTAGAGGATTTGATTGAGAAAGTGAAAGATGTGGTAGTATTGCATGAAGAACCCGGAAGCCAGAGGAAGTTCCTAGCTGCTGTTGGTGGGTAGATGATGATTACACCAAATAAATCAACATCCACGATATCTTCAGACTCCGTGGAACAGAAGGGGACAAATATAACTGAGCCAGATGCAAACGTGCTTCAATCTCCTTTAAACCAACAACTTCGTAGTTCCTCTGATGGTCCGGTGGCCATCCTTTGGGATATTGAAAACTGTCCTGTTCCAAGTGATGTCCGCCCTGAAGATGTAGCTGGTAATATAAGAATGGCTTTACGGGTTCATCCAGTAATTAAAGGAGCAGTTATGATGTTTTCTGCTTATGGGGATTTCAATGCCTTCCCCAGACGGCTGAGGGAGGGCTGTCAAAGAACTGGTGTCAAACTCATTGATGTTCCCAATGGGAGAAAGGATGCTGCTGACAAAGCCATCTTGGTTGACATGTTCTTGTTTGCCCTGGACAACCGTCCCCCTTCTTCTATCTTGTTGATATCTGGAGATGTTGATTTTGCCCCAGCACTTCACATTCTTGGTCAAAGGGGATACACTATAATTCTCGTCATCCCTTCTGGGGTAGGCATTTCATCTGCCCTCAGCAATGCTGGCAAATTTGTATGGGACTGGCACAGTGTGGTTCGTGGTGAAGGTTTTGTGCCCCCGTCAAAGGCTTTAGTGCCACCTCGTATGGGTTCAAATGAGGTTGCTGGATATCTTATGCAGTGCCATATCAATGACAACCTGGATGGACAAAATGAAGAAGAAGCAATAGTTTATAGAGGGATCTCACAGAGCTATTATAACTCCAGGGATTTCTCAGTAGGATCACAATCTCTATCTGAATACAACAGTGGTACCTCTAATGTATCTTGTTTTCCAACAACCTTTAGGTCACATAGCCTTCCATCTGGATTGACTGGGGTGTCAGGAGAACCGATGTCTTTGAGTGACCAAAATGAATGCCTATCGGGTGTACAACCTGAGGATTTAAATGGTCTTAAGAGTCAGCTGGTCAGGTTACTTGAACTTTCTGGAGGATGCCTACCACTGACCCAAGTTCCAGCGGAGTACCAAAAAAATTTTGGAAAACCTCTTCACCTAGCGGAATATGGGGTACGCAAACTCGTAAATCTTTTCAAGAAGATGGGTGACACCATGGCTATAGAAGGAAAAGGGCAAGGAAAAATTGTATATCTTCGAAACTGCAAAGCAGGCCCAAGTGCCCCCCCTTTGGCCCTCGCGAGAAAGAAGAAAGGGAAGGGTGTTCAGGATGAGAATGTTGATGCTGTCAATGGTGGTTGCTCTTTGGATGAGTTCTCAGATGAGGAAAGAGTAGTCATAGAAGGGCATGATGAGCAAAGTAGCTTAAGAAATGGTCATCTGGGAAGAGCAGCCAGATGTGAAATTGATGACATTGAGCAGTTCAAGCACGAGCTGCAAGAGATTCTAGTCAGCTATTCTTGTGGAATACTAATAGGTTGTTTTGAGGCCATATACCAGCAGCGGTACAAGAGACAACTGGAATACCAAAGATTTGGTGTGGACAAGTTAGAGGATTTGATTGAGAAAGTGAAAGATGTGGTAGTATTGCATGAAGAACCCGGAAGCCAGAGGAAGTTCCTAGCTGCTGTTGGTGGGTAGAAAACTTTGATAGACAACTACTATTTTTCTTCAAGAATGTGTTTTTACTTCAAGGTATTCTTGATGAGTGATCAGGATTTGCTTGTTTCTCTAGCAGCCTCGTCCGTTTCATTTTTATTTTATTTTTCTTTCTCTTGTGAAGATGATATGCAGGGCGCATGTGTATTTTTTTTCGTCACTGTGTCCTGCATGGATTTAAATGTTATGAAATTTCTGTTACCCATTACCAACCTTTGTAACTATTCAAAATAGGAGTCGGGAGACATGCTTGTAAAGTGACTTGGTGCTATTTTGTATTTCAGCAATGTACGATAGAAATATCGAGCAAA 3682 0.4351 MMITPNKSTSTISSDSVEQKGTNITEPDANVLQSPLNQQLRSSSDGPVAILWDIENCPVPSDVRPEDVAGNIRMALRVHPVIKGAVMMFSAYGDFNAFPRRLREGCQRTGVKLIDVPNGRKDAADKAILVDMFLFALDNRPPSSILLISGDVDFAPALHILGQRGYTIILVIPSGVGISSALSNAGKFVWDWHSVVRGEGFVPPSKALVPPRMGSNEVAGYLMQCHINDNLDGQNEEEAIVYRGISQSYYNSRDFSVGSQSLSEYNSGTSNVSCFPTTFRSHSLPSGLTGVSGEPMSLSDQNECLSGVQPEDLNGLKSQLVRLLELSGGCLPLTQVPAEYQKNFGKPLHLAEYGVRKLVNLFKKMGDTMAIEGKGQGKIVYLRNCKAGPSAPPLALARKKKGKGVQDENVDAVNGGCSLDEFSDEERVVIEGHDEQSSLRNGHLGRAARCEIDDIEQFKHELQEILVSYSCGILIGCFEAIYQQRYKRQLEYQRFGVDKLEDLIEKVKDVVVLHEEPGSQRKFLAAVGG 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00272 529 Gene3D - 40 194 - -
Bach11g00272 529 Pfam OST-HTH/LOTUS domain 313 380 IPR025605 -
Bach11g00272 529 Pfam OST-HTH/LOTUS domain 455 520 IPR025605 -
Bach11g00272 529 CDD LOTUS 313 382 - -
Bach11g00272 529 CDD PIN_limkain_b1_N_like 47 173 - -
Bach11g00272 529 Gene3D - 309 382 IPR041966 -
Bach11g00272 529 Gene3D - 452 523 IPR041966 -
Bach11g00272 529 Pfam NYN domain 47 186 IPR021139 GO:0004540
Bach11g00272 529 ProSiteProfiles OST-type HTH domain profile. 312 386 IPR025605 -
Bach11g00272 529 PANTHER LIMKAIN B LKAP 21 487 IPR024768 GO:0005777|GO:0010468
Bach11g00272 529 ProSiteProfiles OST-type HTH domain profile. 454 528 IPR025605 -
Bach11g00272 529 MobiDBLite consensus disorder prediction 1 30 - -
Bach11g00272 529 CDD LOTUS 455 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00272 Bach-Chr11 1845132 1847726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00272 48 198 C2H2 Transcription Factor Family AT5G61190 42.384 9.41e-27 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00272 - - gmx:100818186 840.491